PIF7
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
PHYB
Gene Ontology Biological Process
- abscisic acid metabolic process [IMP]
- chromatin organization [IMP]
- circadian regulation of calcium ion oscillation [IMP]
- entrainment of circadian clock [IMP]
- gravitropism [IMP]
- jasmonic acid mediated signaling pathway [IMP]
- photomorphogenesis [IMP]
- photosynthesis [IMP]
- phototropism [IMP]
- red light signaling pathway [IMP]
- regulation of defense response [IMP]
- regulation of seed germination [IMP]
- regulation of transcription, DNA-templated [ISS]
- response to cold [IMP]
- response to far red light [IMP]
- response to low fluence red light stimulus [IMP]
- stomatal complex development [IMP]
- transpiration [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Reconstituted Complex
An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.
Publication
The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyB levels.
We show that a previously uncharacterized Arabidopsis thaliana basic helix-loop-helix (bHLH) phytochrome interacting factor (PIF), designated PIF7, interacts specifically with the far-red light-absorbing Pfr form of phyB through a conserved domain called the active phyB binding motif. Similar to PIF3, upon light exposure, PIF7 rapidly migrates to intranuclear speckles, where it colocalizes with phyB. However, in striking contrast to PIF3, ... [more]
Throughput
- Low Throughput
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| PHYB PIF7 | Co-localization Co-localization Interaction inferred from two proteins that co-localize in the cell by indirect immunofluorescence only when in addition, if one gene is deleted, the other protein becomes mis-localized. Also includes co-dependent association of proteins with promoter DNA in chromatin immunoprecipitation experiments. | Low | - | BioGRID | 1104550 | |
| PIF7 PHYB | Co-localization Co-localization Interaction inferred from two proteins that co-localize in the cell by indirect immunofluorescence only when in addition, if one gene is deleted, the other protein becomes mis-localized. Also includes co-dependent association of proteins with promoter DNA in chromatin immunoprecipitation experiments. | Low | - | BioGRID | 1104551 |
Curated By
- BioGRID