BAIT
CCR1
ATGRP8, GLYCINE-RICH PROTEIN 8, GR-RBP8, GRP8, T22F8.160, T22F8_160, and RNA binding 1, circadian rhythm, cold, glycine-rich RNA-binding protein 8, AT4G39260
glycine-rich RNA-binding protein 8
GO Process (7)
GO Function (1)
GO Component (9)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Arabidopsis thaliana (Columbia)
PREY
CCR2
ATGPR7, ATGRP7, F2G1.4, GLYCINE RICH PROTEIN 7, GLYCINE-RICH RNA-BINDING PROTEIN 7, GR-RBP7, GRP7, and rna binding 2, circadian rhythm, cold, AT2G21660
glycine-rich RNA-binding protein 7
GO Process (15)
GO Function (4)
GO Component (8)
Gene Ontology Biological Process
- DNA duplex unwinding [IDA]
- RNA secondary structure unwinding [IDA]
- alternative mRNA splicing, via spliceosome [IMP]
- circadian rhythm [IEP, TAS]
- innate immune response [IDA, IMP]
- mRNA export from nucleus [IMP]
- regulation of stomatal movement [IMP]
- response to cadmium ion [IEP]
- response to cold [IEP, IGI]
- response to cytokinin [IDA]
- response to osmotic stress [IMP]
- response to salt stress [IEP]
- response to water deprivation [IEP]
- response to zinc ion [IEP]
- vegetative to reproductive phase transition of meristem [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- apoplast [IDA]
- chloroplast [IDA]
- cytoplasm [IDA]
- cytosol [IDA]
- mitochondrion [ISM]
- nucleus [IDA, ISS]
- peroxisome [IDA]
- plasmodesma [IDA]
Arabidopsis thaliana (Columbia)
Protein-RNA
An interaction is detected between and protein and an RNA in vitro.
Publication
Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis.
The Arabidopsis RNA-binding protein AtGRP8 undergoes negative autoregulation at the post-transcriptional level. An elevated AtGRP8 protein level promotes the use of a cryptic 5' splice site to generate an alternatively spliced transcript, as_AtGRP8, retaining the 5' half of the intron with a premature termination codon. In mutants defective in nonsense-mediated decay (NMD) abundance of as_AtGRP8 but not its pre-mRNA is ... [more]
Nucleic Acids Res. Dec. 01, 2008; 36(22);6977-87 [Pubmed: 18987006]
Throughput
- Low Throughput
Related interactions
Curated By
- BioGRID