KAT3
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
SYP121
Gene Ontology Biological Process
- defense response [TAS]
- defense response to fungus [IGI]
- intracellular protein transport [TAS]
- jasmonic acid mediated signaling pathway [IGI]
- maintenance of protein location in plasma membrane [IMP]
- membrane fusion [TAS]
- negative regulation of cellular defense response [IGI]
- negative regulation of defense response [IMP]
- negative regulation of programmed cell death [IGI]
- protein targeting to membrane [IDA]
- protein targeting to plasma membrane [IMP]
- regulation of plant-type hypersensitive response [IGI]
- regulation of stomatal movement [IMP]
- response to abscisic acid [IEP]
- response to fungus [IMP]
- salicylic acid mediated signaling pathway [IGI]
- transpiration [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
PCA
A Protein-Fragment Complementation Assay (PCA) is a protein-protein interaction assay in which a bait protein is expressed as fusion to one of the either N- or C- terminal peptide fragments of a reporter protein and prey protein is expressed as fusion to the complementary N- or C- terminal fragment of the same reporter protein. Interaction of bait and prey proteins bring together complementary fragments, which can then fold into an active reporter, e.g. the split-ubiquitin assay.
Publication
A Novel Motif Essential for SNARE Interaction with the K+ Channel KC1 and Channel Gating in Arabidopsis.
The SNARE (for soluble N-ethylmaleimide-sensitive factor protein attachment protein receptor) protein SYP121 (=SYR1/PEN1) of Arabidopsis thaliana facilitates vesicle traffic, delivering ion channels and other cargo to the plasma membrane, and contributing to plant cell expansion and defense. Recently, we reported that SYP121 also interacts directly with the K(+) channel subunit KC1 and forms a tripartite complex with a second K(+) ... [more]
Throughput
- Low Throughput
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| SYP121 KAT3 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | - | |
| KAT3 SYP121 | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | Low | - | BioGRID | - | |
| KAT3 SYP121 | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | Low | - | BioGRID | - |
Curated By
- BioGRID