BAIT

AT1G19100

F14D16.25, F14D16_25
protein DEFECTIVE IN MERISTEM SILENCING 11
GO Process (2)
GO Function (1)
GO Component (3)

Gene Ontology Biological Process

Gene Ontology Molecular Function

Gene Ontology Cellular Component

Arabidopsis thaliana (Columbia)
PREY

DMS3

DEFECTIVE IN MERISTEM SILENCING 3, IDN1, INVOLVED IN DE NOVO 1, AT3G49250
protein defective in meristem silencing 3
GO Process (2)
GO Function (0)
GO Component (0)

Gene Ontology Biological Process

Arabidopsis thaliana (Columbia)

Reconstituted Complex

An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.

Publication

Involvement of a GHKL ATPase in RNA-Directed DNA Methylation in Arabidopsis thaliana.

Lorkovic ZJ, Naumann U, Matzke AJ, Matzke M

RNA-directed DNA methylation (RdDM) is a small interfering RNA (siRNA)-mediated epigenetic modification that contributes to transposon silencing in plants. RdDM requires a complex transcriptional machinery comprising two RNA polymerase II-related RNA polymerases, called Pol IV and Pol V, as well as chromatin remodelers, transcription factors, and other novel proteins whose roles in the RdDM mechanism remain poorly understood [1-4]. We ... [more]

Unknown May. 02, 2012; 0(0); [Pubmed: 22560611]

Throughput

  • Low Throughput

Curated By

  • BioGRID