BAIT

CHR38

CLASSY1, CLSY, chromatin remodeling 38, AT3G42670
chromatin remodeling 38
GO Process (1)
GO Function (3)
GO Component (2)

Gene Ontology Biological Process

Gene Ontology Molecular Function

Gene Ontology Cellular Component

Arabidopsis thaliana (Columbia)
PREY

RDR2

RNA-dependent RNA polymerase 2, SILENCING MOVEMENT DEFICIENT 1, SMD1, T22B4.110, T22B4_110, AT4G11130
RNA-dependent RNA polymerase 2
Arabidopsis thaliana (Columbia)

Two-hybrid

Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation.

Publication

DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV.

Zhang H, Ma ZY, Zeng L, Tanaka K, Zhang CJ, Ma J, Bai G, Wang P, Zhang SW, Liu ZW, Cai T, Tang K, Liu R, Shi X, He XJ, Zhu JK

DNA methylation is an important epigenetic mark in many eukaryotic organisms. De novo DNA methylation in plants can be achieved by the RNA-directed DNA methylation (RdDM) pathway, where the plant-specific DNA-dependent RNA polymerase IV (Pol IV) transcribes target sequences to initiate 24-nt siRNA production and action. The putative DNA binding protein DTF1/SHH1 of Arabidopsis has been shown to associate with ... [more]

Proc. Natl. Acad. Sci. U.S.A. May. 14, 2013; 110(20);8290-5 [Pubmed: 23637343]

Throughput

  • Low Throughput

Curated By

  • BioGRID