The functional relationships underlying a synthetic genetic network.
Here, we focus on synthetic lethal genetic interactions, examples of genetic enhancements, where mutations in two different genes result in lethality but only when present together. We recently identified the synthetic lethal network around the PKC1 gene encoding the essential protein kinase C of yeast. We found that this network ... is heavily enriched for interactions with genes whose products are closely linked to Pkc1 signaling in vivo. Here, we show that: the PKC1 gene elicits a distinct spectrum of genetic interactions to SLT2, encoding a non-essential component of the very same signaling pathway. We also show that the terminal phenotype underlying the synthetic lethal network around PKC1 is not uniform. Synthetic lethal genetic networks thus appear to be very heterogeneous in nature with important implications for what functional relationships can be discovered from them.
Mesh Terms:
Amino Acid Sequence, Arabidopsis, Arabidopsis Proteins, Cell Wall, DNA, Bacterial, Gene Expression Regulation, Plant, Gene Knockout Techniques, Molecular Sequence Data, Mutation, Plant Leaves, RNA Interference, RNA, Plant, Sequence Alignment, Transcription Factors, Transcriptional Activation
Amino Acid Sequence, Arabidopsis, Arabidopsis Proteins, Cell Wall, DNA, Bacterial, Gene Expression Regulation, Plant, Gene Knockout Techniques, Molecular Sequence Data, Mutation, Plant Leaves, RNA Interference, RNA, Plant, Sequence Alignment, Transcription Factors, Transcriptional Activation
Commun Integr Biol
Date: Aug. 26, 2009
PubMed ID: 19704853
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