BAIT
NXF1
MEX67, TAP
nuclear RNA export factor 1
GO Process (2)
GO Function (2)
GO Component (4)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
PDE2A
CGS-PDE, PDE2A1, PED2A4, cGSPDE
phosphodiesterase 2A, cGMP-stimulated
GO Process (22)
GO Function (9)
GO Component (9)
Gene Ontology Biological Process
- blood coagulation [TAS]
- cAMP catabolic process [IDA, IMP]
- cAMP-mediated signaling [IMP]
- cGMP catabolic process [IDA]
- cGMP-mediated signaling [IMP]
- calcium ion transmembrane transport [TAS]
- cellular response to cGMP [IDA]
- cellular response to drug [IEP, IMP]
- cellular response to granulocyte macrophage colony-stimulating factor stimulus [IDA]
- cellular response to macrophage colony-stimulating factor stimulus [IDA]
- cellular response to mechanical stimulus [ISS]
- cellular response to transforming growth factor beta stimulus [IEP]
- establishment of endothelial barrier [ISS]
- metabolic process [IDA]
- monocyte differentiation [IEP]
- negative regulation of cAMP biosynthetic process [ISS]
- negative regulation of protein import into nucleus, translocation [IDA]
- negative regulation of transcription from RNA polymerase II promoter [IDA]
- negative regulation of vascular permeability [IMP]
- positive regulation of inflammatory response [ISS]
- positive regulation of vascular permeability [IMP]
- protein targeting to mitochondrion [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-RNA
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and associated RNA species identified by Northern blot, RT-PCR, affinity labeling, sequencing, or microarray analysis.
Publication
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
RNA-binding proteins (RBPs) determine RNA fate from synthesis to decay. Employing two complementary protocols for covalent UV crosslinking of RBPs to RNA, we describe a systematic, unbiased, and comprehensive approach, termed "interactome capture," to define the mRNA interactome of proliferating human HeLa cells. We identify 860 proteins that qualify as RBPs by biochemical and statistical criteria, adding more than 300 ... [more]
Cell Jun. 08, 2012; 149(6);1393-406 [Pubmed: 22658674]
Throughput
- High Throughput
Curated By
- BioGRID