TWIST1
Gene Ontology Biological Process
- aortic valve morphogenesis [IMP]
- cell proliferation involved in heart valve development [IMP]
- cellular response to hypoxia [IMP]
- cranial suture morphogenesis [TAS]
- embryonic camera-type eye formation [IMP]
- embryonic cranial skeleton morphogenesis [IMP]
- embryonic digit morphogenesis [TAS]
- eyelid development in camera-type eye [IMP]
- negative regulation of DNA damage response, signal transduction by p53 class mediator [IMP]
- negative regulation of cellular senescence [IMP]
- negative regulation of double-strand break repair [IMP]
- negative regulation of histone phosphorylation [IMP]
- negative regulation of osteoblast differentiation [IMP]
- negative regulation of phosphatidylinositol 3-kinase signaling [IMP]
- negative regulation of transcription from RNA polymerase II promoter [IMP]
- negative regulation of transcription, DNA-templated [ISS]
- ossification [TAS]
- outer ear morphogenesis [TAS]
- positive regulation of angiogenesis [NAS]
- positive regulation of cell motility [IMP, NAS]
- positive regulation of epithelial to mesenchymal transition [IMP]
- positive regulation of fatty acid beta-oxidation [IMP]
- positive regulation of gene expression [IMP]
- positive regulation of interleukin-6 secretion [IMP]
- positive regulation of monocyte chemotactic protein-1 production [IMP]
- positive regulation of transcription from RNA polymerase II promoter [IDA, IMP]
- positive regulation of transcription regulatory region DNA binding [IMP]
- positive regulation of tumor necrosis factor production [IMP]
- regulation of bone mineralization [IMP]
- transcription from RNA polymerase II promoter [IDA]
Gene Ontology Molecular Function
BCL6
Gene Ontology Biological Process
- cellular response to DNA damage stimulus [IDA]
- negative regulation of B cell apoptotic process [NAS]
- negative regulation of cell growth [IDA]
- negative regulation of transcription from RNA polymerase II promoter [IDA]
- negative regulation of transcription, DNA-templated [IMP, NAS]
- positive regulation of apoptotic process [IDA]
- protein import into nucleus, translocation [IGI]
- regulation of germinal center formation [NAS]
- regulation of immune response [NAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Reconstituted Complex
An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.
Publication
In silico prediction of physical protein interactions and characterization of interactome orphans.
Protein-protein interactions (PPIs) are useful for understanding signaling cascades, predicting protein function, associating proteins with disease and fathoming drug mechanism of action. Currently, only ∼10% of human PPIs may be known, and about one-third of human proteins have no known interactions. We introduce FpClass, a data mining-based method for proteome-wide PPI prediction. At an estimated false discovery rate of 60%, ... [more]
Throughput
- Low Throughput
Curated By
- BioGRID