BAIT

DCP1

ATDCP1, decapping 1, AT1G08370
mRNA-decapping enzyme 1
GO Process (1)
GO Function (3)
GO Component (3)

Gene Ontology Biological Process

Gene Ontology Molecular Function

Gene Ontology Cellular Component

Arabidopsis thaliana (Columbia)
PREY

XI-I

ATXI-I, F4I10.130, F4I10_130, MYOSIN XI I, MYOSIN XI-15, XI-15, AT4G33200
myosin-15
GO Process (1)
GO Function (1)
GO Component (2)

Gene Ontology Biological Process

Gene Ontology Molecular Function

Gene Ontology Cellular Component

Arabidopsis thaliana (Columbia)

Reconstituted Complex

An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.

Publication

Processing body movement in Arabidopsis thaliana depends on an interaction between myosins and DCP1.

Steffens A, Jaegle B, Tresch A, Huelskamp M, Jakoby M

Processing bodies (P-bodies) are cytoplasmic RNA protein aggregates responsible for storage, degradation and quality control of translationally repressed mRNAs in eukaryotic cells. In mammals, P-body related RNA and protein exchanges are actomyosin dependent, whereas P-body movement requires intact microtubules. In contrast, in plants P-body motility is actin based. In this study we show the direct interaction of the P-body core ... [more]

Plant Physiol. Feb. 13, 2014; 0(0); [Pubmed: 24525673]

Throughput

  • Low Throughput

Related interactions

InteractionExperimental Evidence CodeDatasetThroughputScoreCurated ByNotes
DCP1 XI-I
FRET
FRET

An interaction is inferred when close proximity of interaction partners is detected by fluorescence resonance energy transfer between pairs of fluorophore-labeled molecules, such as occurs between CFP (donor) and YFP (acceptor) fusion proteins.

Low-BioGRID
1172798
XI-I DCP1
Two-hybrid
Two-hybrid

Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation.

Low-BioGRID
-

Curated By

  • BioGRID