NUFIP1
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
PDE2A
Gene Ontology Biological Process
- blood coagulation [TAS]
- cAMP catabolic process [IDA, IMP]
- cAMP-mediated signaling [IMP]
- cGMP catabolic process [IDA]
- cGMP-mediated signaling [IMP]
- calcium ion transmembrane transport [TAS]
- cellular response to cGMP [IDA]
- cellular response to drug [IEP, IMP]
- cellular response to granulocyte macrophage colony-stimulating factor stimulus [IDA]
- cellular response to macrophage colony-stimulating factor stimulus [IDA]
- cellular response to mechanical stimulus [ISS]
- cellular response to transforming growth factor beta stimulus [IEP]
- establishment of endothelial barrier [ISS]
- metabolic process [IDA]
- monocyte differentiation [IEP]
- negative regulation of cAMP biosynthetic process [ISS]
- negative regulation of protein import into nucleus, translocation [IDA]
- negative regulation of transcription from RNA polymerase II promoter [IDA]
- negative regulation of vascular permeability [IMP]
- positive regulation of inflammatory response [ISS]
- positive regulation of vascular permeability [IMP]
- protein targeting to mitochondrion [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
The BioPlex Network: A Systematic Exploration of the Human Interactome.
Protein interactions form a network whose structure drives cellular function and whose organization informs biological inquiry. Using high-throughput affinity-purification mass spectrometry, we identify interacting partners for 2,594 human proteins in HEK293T cells. The resulting network (BioPlex) contains 23,744 interactions among 7,668 proteins with 86% previously undocumented. BioPlex accurately depicts known complexes, attaining 80%-100% coverage for most CORUM complexes. The network ... [more]
Quantitative Score
- 0.986363012 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 1.0 HEK 293T cells CompPASS score = 0.986363012, threshold = 0.75. Quantitative scores calculated by CompPASS-Plus (Huttlin et al. Cell, 2015, PMID: 26186194).
- See BioPlex Interactome for details (https://bioplex.hms.harvard.edu/index.php).
- This data has also been reanalyzed as part of BioPlex 2.0 (PMID: 28514442) and BioPlex 3.0 (PMID: 33961781). Only scores from within BioPlex 1.0 (PMID: 26186194) should be compared directly.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| NUFIP1 PDE2A | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9998 | BioGRID | 2228114 | |
| NUFIP1 PDE2A | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9826 | BioGRID | 3068795 |
Curated By
- BioGRID