LGALS8
Gene Ontology Molecular Function
Gene Ontology Cellular Component
CD63
Gene Ontology Biological Process
- blood coagulation [TAS]
- cell migration [IMP]
- cell-matrix adhesion [IMP]
- cellular protein localization [IDA]
- endosome to melanosome transport [IMP]
- pigment granule maturation [IMP]
- platelet activation [TAS]
- platelet degranulation [TAS]
- positive regulation of integrin-mediated signaling pathway [IMP]
- positive regulation of receptor internalization [IMP]
- regulation of rubidium ion transport [IDA]
- regulation of vascular endothelial growth factor signaling pathway [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- cell surface [IDA]
- endosome lumen [IDA]
- endosome membrane [IDA]
- extracellular vesicular exosome [IDA]
- integral component of plasma membrane [TAS]
- intrinsic component of plasma membrane [IDA]
- late endosome membrane [IDA]
- lysosomal membrane [IDA]
- multivesicular body, internal vesicle [IDA]
- plasma membrane [TAS]
- platelet dense granule membrane [TAS]
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
The BioPlex Network: A Systematic Exploration of the Human Interactome.
Protein interactions form a network whose structure drives cellular function and whose organization informs biological inquiry. Using high-throughput affinity-purification mass spectrometry, we identify interacting partners for 2,594 human proteins in HEK293T cells. The resulting network (BioPlex) contains 23,744 interactions among 7,668 proteins with 86% previously undocumented. BioPlex accurately depicts known complexes, attaining 80%-100% coverage for most CORUM complexes. The network ... [more]
Quantitative Score
- 0.992981133 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 1.0 HEK 293T cells CompPASS score = 0.992981133, threshold = 0.75. Quantitative scores calculated by CompPASS-Plus (Huttlin et al. Cell, 2015, PMID: 26186194).
- See BioPlex Interactome for details (https://bioplex.hms.harvard.edu/index.php).
- This data has also been reanalyzed as part of BioPlex 2.0 (PMID: 28514442) and BioPlex 3.0 (PMID: 33961781). Only scores from within BioPlex 1.0 (PMID: 26186194) should be compared directly.
Related interactions
Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
---|---|---|---|---|---|---|
LGALS8 CD63 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9684 | BioGRID | 2248068 | |
CD63 LGALS8 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9971 | BioGRID | 3184696 | |
LGALS8 CD63 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.8566 | BioGRID | 3096038 |
Curated By
- BioGRID