BAIT
NUDT13
RP11-152N13.13-004
nudix (nucleoside diphosphate linked moiety X)-type motif 13
GO Process (0)
GO Function (0)
GO Component (0)
Homo sapiens
PREY
PDCD6
ALG-2, ALG2, PEF1B
programmed cell death 6
GO Process (13)
GO Function (7)
GO Component (6)
Gene Ontology Biological Process
- apoptotic signaling pathway [TAS]
- cellular response to heat [IDA]
- intracellular protein transport [IDA]
- negative regulation of TOR signaling [IDA]
- negative regulation of protein kinase B signaling [IDA]
- negative regulation of vascular endothelial growth factor receptor signaling pathway [IDA]
- positive regulation of angiogenesis [IDA]
- positive regulation of cysteine-type endopeptidase activity involved in apoptotic process [IDA]
- positive regulation of endothelial cell migration [IDA]
- positive regulation of endothelial cell proliferation [IDA]
- proteolysis [IBA]
- response to calcium ion [ISS]
- vascular endothelial growth factor receptor-2 signaling pathway [IDA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Co-fractionation
Interaction inferred from the presence of two or more protein subunits in a partially purified protein preparation. If co-fractionation is demonstrated between 3 or more proteins, then add them as a complex.
Publication
Panorama of ancient metazoan macromolecular complexes
Macromolecular complexes are essential to conserved biological processes, but their prevalence across animals is unclear. By combining extensive biochemical fractionation with quantitative mass spectrometry, here we directly examined the composition of soluble multiprotein complexes among diverse metazoan models. Using an integrative approach, we generated a draft conservation map consisting of more than one million putative high-confidence co-complex interactions for species ... [more]
Nature Sep. 17, 2015; 525(7569);339-44 [Pubmed: 26344197]
Quantitative Score
- 0.081751637 [Confidence Score]
Throughput
- High Throughput
Additional Notes
- Fractionation was combined with mass spectrometry from five diverse animal species to predict co-complex protein interactions conserved across metazoa using an integrative computational scoring procedure along with an SVM approach. The significant data set of 16655 PPI, was derived from a set of more than 1M interactions by examining a ROC curve of predicted interactions against reference annotated complexes at a 67.5% cumulative precision.
Curated By
- BioGRID