BAIT
PPM1B
PP2C-beta, PP2C-beta-X, PP2CB, PP2CBETA, PPC2BETAX
protein phosphatase, Mg2+/Mn2+ dependent, 1B
GO Process (8)
GO Function (2)
GO Component (2)
Gene Ontology Biological Process
- N-terminal protein myristoylation [ISS]
- cytokine-mediated signaling pathway [TAS]
- negative regulation of I-kappaB kinase/NF-kappaB signaling [IMP]
- negative regulation of NF-kappaB import into nucleus [IMP]
- negative regulation of defense response to virus [IMP]
- negative regulation of interferon-beta production [IMP]
- peptidyl-threonine dephosphorylation [IDA]
- protein dephosphorylation [IMP]
Gene Ontology Molecular Function
Homo sapiens
PREY
STK40
SHIK, SgK495
serine/threonine kinase 40
GO Process (0)
GO Function (1)
GO Component (2)
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Co-fractionation
Interaction inferred from the presence of two or more protein subunits in a partially purified protein preparation. If co-fractionation is demonstrated between 3 or more proteins, then add them as a complex.
Publication
Panorama of ancient metazoan macromolecular complexes
Macromolecular complexes are essential to conserved biological processes, but their prevalence across animals is unclear. By combining extensive biochemical fractionation with quantitative mass spectrometry, here we directly examined the composition of soluble multiprotein complexes among diverse metazoan models. Using an integrative approach, we generated a draft conservation map consisting of more than one million putative high-confidence co-complex interactions for species ... [more]
Nature Sep. 17, 2015; 525(7569);339-44 [Pubmed: 26344197]
Quantitative Score
- 0.1553152 [Confidence Score]
Throughput
- High Throughput
Additional Notes
- Fractionation was combined with mass spectrometry from five diverse animal species to predict co-complex protein interactions conserved across metazoa using an integrative computational scoring procedure along with an SVM approach. The significant data set of 16655 PPI, was derived from a set of more than 1M interactions by examining a ROC curve of predicted interactions against reference annotated complexes at a 67.5% cumulative precision.
Curated By
- BioGRID