BAIT
CHAF1A
AL023013, AL024058, CAF-1, Cac1p
chromatin assembly factor 1, subunit A (p150)
GO Process (3)
GO Function (3)
GO Component (4)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
CDH1
AA960649, E-cad, Ecad, L-CAM, UVO, Um
cadherin 1
GO Process (30)
GO Function (10)
GO Component (26)
Gene Ontology Biological Process
- adherens junction organization [ISO]
- calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules [IDA]
- cellular response to amino acid stimulus [IDA]
- cellular response to indole-3-methanol [ISO]
- cellular response to lithium ion [ISO]
- cochlea development [IMP]
- epithelial cell morphogenesis [IMP]
- establishment of protein localization to plasma membrane [IDA, ISO]
- in utero embryonic development [IMP]
- intestinal epithelial cell development [IMP]
- negative regulation of canonical Wnt signaling pathway [IMP]
- negative regulation of cell-cell adhesion [ISO]
- negative regulation of epithelial cell proliferation [IMP]
- positive regulation of transcription factor import into nucleus [ISO]
- positive regulation of transcription, DNA-templated [ISO]
- protein homooligomerization [IDA]
- protein localization to plasma membrane [ISO]
- protein metabolic process [IDA]
- regulation of branching involved in salivary gland morphogenesis [IMP]
- regulation of cysteine-type endopeptidase activity involved in apoptotic process [IDA]
- regulation of neuron migration [IDA]
- regulation of protein localization [IMP]
- regulation of protein localization to cell surface [IMP]
- regulation of water loss via skin [IMP]
- salivary gland cavitation [IMP]
- sensory perception of sound [IMP]
- single organismal cell-cell adhesion [IMP, ISO]
- synapse assembly [ISO]
- tight junction assembly [IMP]
- trophectodermal cell differentiation [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- Schmidt-Lanterman incisure [IDA]
- actin cytoskeleton [ISO]
- adherens junction [IDA]
- aggresome [ISO]
- apical junction complex [IDA, ISO]
- apical part of cell [IDA]
- axon [IDA]
- axon terminus [IDA]
- basolateral plasma membrane [IDA]
- catenin complex [IDA, ISO]
- cell junction [ISO]
- cell periphery [IDA]
- cell surface [IDA]
- cell-cell adherens junction [IDA, ISO]
- cell-cell junction [IDA, ISO]
- cytoplasm [IDA, ISO]
- cytoplasmic side of plasma membrane [ISO]
- extracellular vesicular exosome [ISO]
- focal adhesion [ISO]
- integral component of membrane [ISO]
- lateral loop [IDA]
- lateral plasma membrane [ISO]
- node of Ranvier [IDA]
- perinuclear region of cytoplasm [ISO]
- plasma membrane [IDA, ISO]
- trans-Golgi network [ISO]
Mus musculus
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Systematic identification of factors for provirus silencing in embryonic stem cells.
Embryonic stem cells (ESCs) repress the expression of exogenous proviruses and endogenous retroviruses (ERVs). Here, we systematically dissected the cellular factors involved in provirus repression in embryonic carcinomas (ECs) and ESCs by a genome-wide siRNA screen. Histone chaperones (Chaf1a/b), sumoylation factors (Sumo2/Ube2i/Sae1/Uba2/Senp6), and chromatin modifiers (Trim28/Eset/Atf7ip) are key determinants that establish provirus silencing. RNA-seq analysis uncovered the roles of Chaf1a/b and ... [more]
Cell Sep. 24, 2015; 163(1);230-45 [Pubmed: 26365490]
Throughput
- High Throughput
Additional Notes
- Figure 7
Curated By
- BioGRID