BAIT
PTAR1
RP11-109D9.2
protein prenyltransferase alpha subunit repeat containing 1
GO Process (0)
GO Function (0)
GO Component (0)
Homo sapiens
PREY
UBE2D3
E2(17)KB3, UBC4/5, UBCH5C
ubiquitin-conjugating enzyme E2D 3
GO Process (23)
GO Function (3)
GO Component (3)
Gene Ontology Biological Process
- BMP signaling pathway [TAS]
- MyD88-independent toll-like receptor signaling pathway [TAS]
- TRIF-dependent toll-like receptor signaling pathway [TAS]
- cellular protein modification process [TAS]
- cellular response to hypoxia [TAS]
- gene expression [TAS]
- innate immune response [TAS]
- negative regulation of transcription from RNA polymerase II promoter [TAS]
- negative regulation of type I interferon production [TAS]
- proteasome-mediated ubiquitin-dependent protein catabolic process [IDA]
- protein K11-linked ubiquitination [IDA]
- protein K48-linked ubiquitination [IDA]
- protein monoubiquitination [IDA]
- protein polyubiquitination [IDA]
- protein ubiquitination [IDA]
- regulation of transcription from RNA polymerase II promoter in response to hypoxia [TAS]
- toll-like receptor 3 signaling pathway [TAS]
- toll-like receptor 4 signaling pathway [TAS]
- toll-like receptor signaling pathway [TAS]
- transcription initiation from RNA polymerase II promoter [TAS]
- transcription, DNA-templated [TAS]
- transforming growth factor beta receptor signaling pathway [TAS]
- ubiquitin-dependent protein catabolic process [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Synthetic Lethality
A genetic interaction is inferred when mutations or deletions in separate genes, each of which alone causes a minimal phenotype, result in lethality when combined in the same cell under a given condition.
Publication
Gene essentiality and synthetic lethality in haploid human cells.
Although the genes essential for life have been identified in less complex model organisms, their elucidation in human cells has been hindered by technical barriers. We used extensive mutagenesis in haploid human cells to identify approximately 2000 genes required for optimal fitness under culture conditions. To study the principles of genetic interactions in human cells, we created a synthetic lethality ... [more]
Science Nov. 27, 2015; 350(6264);1092-6 [Pubmed: 26472760]
Throughput
- Low Throughput
Ontology Terms
- phenotype: growth abnormality (HP:0001507)
Additional Notes
- Aphenotypic negative genetic interaction (Synonym: Synthetic)
- The authors note that their method cannot clearly distinguish between synthetic lethal or synthetic sick interactions (Figure 3B).
Curated By
- BioGRID