PAX6
Gene Ontology Biological Process
- blood vessel development [IMP]
- central nervous system development [TAS]
- cornea development in camera-type eye [IMP]
- eye development [TAS]
- glucose homeostasis [IMP]
- iris morphogenesis [IMP]
- negative regulation of neurogenesis [ISS]
- neuron fate commitment [NAS]
- organ morphogenesis [TAS]
- pancreatic A cell development [IMP]
- positive regulation of gene expression [IMP]
- positive regulation of transcription from RNA polymerase II promoter [ISS]
- positive regulation of transcription, DNA-templated [IMP]
- protein ubiquitination [ISS]
- response to wounding [IEP]
- transcription from RNA polymerase II promoter [IMP]
- visual perception [TAS]
Gene Ontology Molecular Function- DNA binding [TAS]
- R-SMAD binding [IPI]
- RNA polymerase II core promoter sequence-specific DNA binding [IDA]
- histone acetyltransferase binding [ISS]
- protein binding [IPI]
- protein kinase binding [ISS]
- sequence-specific DNA binding RNA polymerase II transcription factor activity [IDA]
- sequence-specific DNA binding transcription factor activity [TAS]
- transcription factor binding [ISS]
- ubiquitin-protein transferase activity [ISS]
- DNA binding [TAS]
- R-SMAD binding [IPI]
- RNA polymerase II core promoter sequence-specific DNA binding [IDA]
- histone acetyltransferase binding [ISS]
- protein binding [IPI]
- protein kinase binding [ISS]
- sequence-specific DNA binding RNA polymerase II transcription factor activity [IDA]
- sequence-specific DNA binding transcription factor activity [TAS]
- transcription factor binding [ISS]
- ubiquitin-protein transferase activity [ISS]
Gene Ontology Cellular Component
MID1
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Reconstituted Complex
An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.
Publication
Hedgehog-dependent E3-ligase Midline1 regulates ubiquitin-mediated proteasomal degradation of Pax6 during visual system development.
Pax6 is a key transcription factor involved in eye, brain, and pancreas development. Although pax6 is expressed in the whole prospective retinal field, subsequently its expression becomes restricted to the optic cup by reciprocal transcriptional repression of pax6 and pax2 However, it remains unclear how Pax6 protein is removed from the eyestalk territory on time. Here, we report that Mid1, ... [more]
Throughput
- Low Throughput
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| PAX6 MID1 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | - |
Curated By
- BioGRID