APOM
Gene Ontology Biological Process
- cholesterol efflux [IDA, IMP]
- cholesterol homeostasis [IC]
- high-density lipoprotein particle assembly [ISS]
- high-density lipoprotein particle clearance [ISS]
- high-density lipoprotein particle remodeling [IMP]
- negative regulation of plasma lipoprotein particle oxidation [IDA]
- reverse cholesterol transport [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
USP16
Gene Ontology Biological Process
- cell cycle [TAS]
- cellular response to DNA damage stimulus [IDA]
- histone H2A K63-linked deubiquitination [IMP]
- histone deubiquitination [IDA]
- mitotic nuclear division [IDA]
- monoubiquitinated histone H2A deubiquitination [ISS]
- positive regulation of transcription from RNA polymerase II promoter [ISS]
- positive regulation of transcription, DNA-templated [IMP]
- positive regulation of translational elongation [IMP]
- proteasome-mediated ubiquitin-dependent protein catabolic process [IBA]
- protein homotetramerization [IPI]
- regulation of proteasomal protein catabolic process [IBA]
- regulation of transcription from RNA polymerase II promoter [ISS]
Gene Ontology Molecular Function
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Architecture of the human interactome defines protein communities and disease networks.
The physiology of a cell can be viewed as the product of thousands of proteins acting in concert to shape the cellular response. Coordination is achieved in part through networks of protein-protein interactions that assemble functionally related proteins into complexes, organelles, and signal transduction pathways. Understanding the architecture of the human proteome has the potential to inform cellular, structural, and ... [more]
Quantitative Score
- 0.999711318 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 2.0 HEK 293T cells CompPASS score = 0.999711318, threshold = 0.75. Quantitative scores calculated by CompPASS-Plus (Huttlin et al. Cell, 2015, PMID: 26186194).
- See BioPlex Interactome for details (https://bioplex.hms.harvard.edu/index.php).
- This data has also been reanalyzed as part of BioPlex 3.0 (PMID: 33961781) and may be re-scored from BioPlex 1.0 (PMID: 26186194). Only scores from within BioPlex 2.0 (PMID: 28514442) should be compared directly.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| APOM USP16 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9998 | BioGRID | 3071487 |
Curated By
- BioGRID