BAIT
UBC
2700054O04Rik, AI194771, Rps27a, TI-225, Uba52, Ubb
ubiquitin C
GO Process (1)
GO Function (3)
GO Component (2)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
PML
1200009E24Rik, AI661194, Trim19
promyelocytic leukemia
GO Process (56)
GO Function (9)
GO Component (10)
Gene Ontology Biological Process
- DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest [IMP]
- PML body organization [IDA, ISO]
- SMAD protein import into nucleus [IMP]
- activation of cysteine-type endopeptidase activity involved in apoptotic process [IMP]
- apoptotic process [ISO]
- branching involved in mammary gland duct morphogenesis [IMP]
- cell aging [IMP]
- cell cycle arrest [IMP, ISO]
- cell fate commitment [IMP]
- cellular response to interleukin-4 [IDA]
- cellular senescence [ISO]
- circadian regulation of gene expression [IDA]
- common-partner SMAD protein phosphorylation [IMP]
- endoplasmic reticulum calcium ion homeostasis [IMP]
- entrainment of circadian clock by photoperiod [IDA]
- extrinsic apoptotic signaling pathway [IMP]
- innate immune response [IDA, ISO]
- intrinsic apoptotic signaling pathway by p53 class mediator [IMP]
- intrinsic apoptotic signaling pathway in response to DNA damage [IMP, ISO]
- intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [IMP]
- intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [IMP]
- intrinsic apoptotic signaling pathway in response to oxidative stress [IMP]
- maintenance of protein location in nucleus [ISO]
- myeloid cell differentiation [IMP]
- negative regulation of angiogenesis [IMP, ISO]
- negative regulation of cell growth [ISO]
- negative regulation of cell proliferation [IMP, ISO]
- negative regulation of mitotic cell cycle [ISO]
- negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process [ISO]
- negative regulation of telomerase activity [ISO]
- negative regulation of telomere maintenance via telomerase [ISO]
- negative regulation of transcription, DNA-templated [ISO]
- negative regulation of translation in response to oxidative stress [ISO]
- negative regulation of viral release from host cell [IDA, ISO]
- positive regulation of apoptotic process involved in mammary gland involution [ISO]
- positive regulation of apoptotic signaling pathway [IGI, IMP]
- positive regulation of defense response to virus by host [ISO]
- positive regulation of extrinsic apoptotic signaling pathway [ISO]
- positive regulation of histone deacetylation [ISO]
- proteasome-mediated ubiquitin-dependent protein catabolic process [ISO]
- protein complex assembly [ISO]
- protein stabilization [ISO]
- protein targeting [ISO]
- regulation of MHC class I biosynthetic process [IDA]
- regulation of calcium ion transport into cytosol [IMP]
- regulation of circadian rhythm [IDA]
- regulation of double-strand break repair [ISO]
- regulation of nucleic acid-templated transcription [TAS]
- regulation of protein phosphorylation [IMP]
- regulation of transcription, DNA-templated [IDA, ISO]
- response to UV [IMP]
- response to cytokine [ISO]
- response to gamma radiation [IMP]
- response to hypoxia [IMP, ISO]
- retinoic acid receptor signaling pathway [IMP]
- transforming growth factor beta receptor signaling pathway [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
Reconstituted Complex
An interaction is detected between purified proteins in vitro.
Publication
An Interaction Landscape of Ubiquitin Signaling.
Intracellular signaling via the covalent attachment of different ubiquitin linkages to protein substrates is fundamental to many cellular processes. Although linkage-selective ubiquitin interactors have been studied on a case-by-case basis, proteome-wide analyses have not been conducted yet. Here, we present ubiquitin interactor affinity enrichment-mass spectrometry (UbIA-MS), a quantitative interaction proteomics method that makes use of chemically synthesized diubiquitin to enrich ... [more]
Mol. Cell Mar. 02, 2017; 65(5);941-955.e8 [Pubmed: 28190767]
Throughput
- High Throughput
Additional Notes
- #LPPI
- Chemically synthesized diubiquitin
- Likely protein-protein interaction
- Mouse embryonic stem cells (ESCs)
- Ubiquitin interactor affinity enrichment-mass spectrometry (UbIA-MS)
Curated By
- BioGRID