UBC
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
ATXN3
Gene Ontology Biological Process
- actin cytoskeleton organization [ISO]
- cellular response to heat [IMP]
- cellular response to misfolded protein [IMP]
- exploration behavior [IMP]
- intermediate filament cytoskeleton organization [ISO]
- microtubule cytoskeleton organization [ISO]
- misfolded or incompletely synthesized protein catabolic process [IMP]
- monoubiquitinated protein deubiquitination [IDA]
- proteasome-mediated ubiquitin-dependent protein catabolic process [IMP]
- protein K48-linked deubiquitination [ISO]
- protein K63-linked deubiquitination [ISO]
- proteolysis [ISO]
- regulation of cell-substrate adhesion [IMP, ISO]
- ubiquitin-dependent protein catabolic process [IMP]
Gene Ontology Molecular Function- ATPase binding [ISO]
- Lys48-specific deubiquitinase activity [ISO]
- Lys63-specific deubiquitinase activity [ISO]
- RNA polymerase II regulatory region DNA binding [ISO]
- histone deacetylase activity [ISO]
- identical protein binding [ISO]
- protein binding [IPI]
- ubiquitin protein ligase binding [IPI, ISO]
- ubiquitin thiolesterase activity [IDA]
- ubiquitin-specific protease activity [IDA]
- ATPase binding [ISO]
- Lys48-specific deubiquitinase activity [ISO]
- Lys63-specific deubiquitinase activity [ISO]
- RNA polymerase II regulatory region DNA binding [ISO]
- histone deacetylase activity [ISO]
- identical protein binding [ISO]
- protein binding [IPI]
- ubiquitin protein ligase binding [IPI, ISO]
- ubiquitin thiolesterase activity [IDA]
- ubiquitin-specific protease activity [IDA]
Gene Ontology Cellular Component
Reconstituted Complex
An interaction is detected between purified proteins in vitro.
Publication
An Interaction Landscape of Ubiquitin Signaling.
Intracellular signaling via the covalent attachment of different ubiquitin linkages to protein substrates is fundamental to many cellular processes. Although linkage-selective ubiquitin interactors have been studied on a case-by-case basis, proteome-wide analyses have not been conducted yet. Here, we present ubiquitin interactor affinity enrichment-mass spectrometry (UbIA-MS), a quantitative interaction proteomics method that makes use of chemically synthesized diubiquitin to enrich ... [more]
Throughput
- High Throughput
Additional Notes
- #LPPI
- Chemically synthesized diubiquitin
- Likely protein-protein interaction
- Mouse embryonic stem cells (ESCs)
- Ubiquitin interactor affinity enrichment-mass spectrometry (UbIA-MS)
Related interactions
Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
---|---|---|---|---|---|---|
ATXN3 UBC | Co-crystal Structure Co-crystal Structure Interaction directly demonstrated at the atomic level by X-ray crystallography. Also used for NMR or Electron Microscopy (EM) structures. If there is no obvious bait-hit directionality to the interaction involving 3 or more proteins, then the co-crystallized proteins should be listed as a complex. | Low | - | BioGRID | 1108418 | |
ATXN3 UBC | Reconstituted Complex Reconstituted Complex An interaction is detected between purified proteins in vitro. | Low | - | BioGRID | 1108410 |
Curated By
- BioGRID