PHYL
Gene Ontology Biological Process
- R1/R6 cell fate commitment [IEP, IMP]
- R7 cell development [TAS]
- R7 cell fate commitment [IEP, IMP]
- Ras protein signal transduction [IGI]
- compound eye photoreceptor cell differentiation [IMP]
- lateral inhibition [IMP]
- peripheral nervous system development [IMP]
- proteasomal protein catabolic process [IDA]
- regulation of Notch signaling pathway [IDA]
- regulation of Wnt signaling pathway [IDA]
- sensory organ boundary specification [IMP]
- sensory organ precursor cell fate determination [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
TTK
Gene Ontology Biological Process
- R1/R6 development [IMP]
- R7 cell development [IMP, TAS]
- border follicle cell migration [IMP]
- brain morphogenesis [IMP]
- branch fusion, open tracheal system [IMP]
- branching involved in open tracheal system development [IMP]
- cell fate determination [TAS]
- chitin-based cuticle development [IMP]
- compound eye cone cell differentiation [IMP]
- compound eye corneal lens morphogenesis [IMP]
- dendrite morphogenesis [IMP]
- dorsal appendage formation [IMP]
- dorsal trunk growth, open tracheal system [IMP]
- imaginal disc-derived wing morphogenesis [IMP]
- inter-male aggressive behavior [IMP]
- locomotion involved in locomotory behavior [IMP]
- negative regulation of transcription from RNA polymerase II promoter [NAS]
- negative regulation of transcription, DNA-templated [IDA, IGI]
- neuron development [IMP]
- ovarian follicle cell development [IMP]
- peripheral nervous system development [TAS]
- positive regulation of DNA binding [IDA]
- positive regulation of transcription from RNA polymerase II promoter [IDA]
- regulation of cell shape [IMP]
- regulation of compound eye cone cell fate specification [IGI, IMP]
- regulation of embryonic cell shape [IMP]
- regulation of transcription from RNA polymerase II promoter [NAS]
- regulation of tube size, open tracheal system [IMP]
- startle response [IMP]
- tracheal outgrowth, open tracheal system [IMP]
Gene Ontology Molecular Function- DNA binding [IDA]
- POZ domain binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription [IDA]
- RNA polymerase II distal enhancer sequence-specific DNA binding [IDA]
- chromatin binding [IDA]
- protein binding [IPI]
- protein homodimerization activity [IDA, IPI]
- sequence-specific DNA binding transcription factor activity [NAS]
- DNA binding [IDA]
- POZ domain binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription [IDA]
- RNA polymerase II distal enhancer sequence-specific DNA binding [IDA]
- chromatin binding [IDA]
- protein binding [IPI]
- protein homodimerization activity [IDA, IPI]
- sequence-specific DNA binding transcription factor activity [NAS]
Gene Ontology Cellular Component
Affinity Capture-Western
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins.
Publication
Photoreceptor cell differentiation requires regulated proteolysis of the transcriptional repressor Tramtrack.
The transcription repressor Tramtrack (TTK) is found in cone cells but not photoreceptor cells of the Drosophila eye. We show that down-regulation of TTK expression occurs in photoreceptor cells and is required for their fate determination. Down-regulation requires the presence of Phyllopod (PHYL), which is induced by the RAS pathway, and Seven In Absentia (SINA). Loss of either gene causes ... [more]
Throughput
- Low Throughput
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| TTK PHYL | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | FlyBase | - | |
| TTK PHYL | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | - | |
| TTK PHYL | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | FlyBase | - | |
| PHYL TTK | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | FlyBase | - | |
| PHYL TTK | Phenotypic Enhancement Phenotypic Enhancement A genetic interaction is inferred when mutation or overexpression of one gene results in enhancement of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene. | Low | - | FlyBase | - | |
| PHYL TTK | Phenotypic Enhancement Phenotypic Enhancement A genetic interaction is inferred when mutation or overexpression of one gene results in enhancement of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene. | Low | - | FlyBase | - | |
| PHYL TTK | Phenotypic Suppression Phenotypic Suppression A genetic interaction is inferred when mutation or over expression of one gene results in suppression of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene. | Low | - | FlyBase | - | |
| PHYL TTK | Phenotypic Suppression Phenotypic Suppression A genetic interaction is inferred when mutation or over expression of one gene results in suppression of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene. | Low | - | FlyBase | - | |
| TTK PHYL | Phenotypic Suppression Phenotypic Suppression A genetic interaction is inferred when mutation or over expression of one gene results in suppression of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene. | Low | - | FlyBase | - | |
| PHYL TTK | Phenotypic Suppression Phenotypic Suppression A genetic interaction is inferred when mutation or over expression of one gene results in suppression of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene. | Low | - | FlyBase | - | |
| TTK PHYL | Reconstituted Complex Reconstituted Complex An interaction is detected between purified proteins in vitro. | Low | - | BioGRID | - | |
| PHYL TTK | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | High | - | BioGRID | - | |
| PHYL TTK | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | Low | - | BioGRID | - |