BAIT
TSC1
RP23-362N19.3
tuberous sclerosis 1
GO Process (33)
GO Function (5)
GO Component (12)
Gene Ontology Biological Process
- activation of Rho GTPase activity [ISO]
- cardiac muscle cell differentiation [IMP]
- cell projection organization [IMP]
- cell-matrix adhesion [ISO]
- cerebral cortex development [IMP]
- embryo development [IMP]
- glucose import [IMP]
- hippocampus development [IMP]
- kidney development [IMP]
- myelination [IMP]
- negative regulation of TOR signaling [IBA, ISO]
- negative regulation of cell proliferation [IMP, ISO]
- negative regulation of cell size [IGI, IMP]
- negative regulation of insulin receptor signaling pathway [IBA]
- negative regulation of translation [ISO]
- nervous system development [IMP]
- neural tube closure [IMP]
- positive regulation of focal adhesion assembly [ISO]
- potassium ion transport [IGI, IMP]
- protein heterooligomerization [ISO]
- protein stabilization [ISO]
- rRNA export from nucleus [ISO]
- regulation of Ras GTPase activity [IBA]
- regulation of actin cytoskeleton organization [IBA, ISO]
- regulation of cell cycle [IBA]
- regulation of cell-matrix adhesion [ISO]
- regulation of focal adhesion assembly [ISO]
- regulation of phosphoprotein phosphatase activity [ISO]
- regulation of protein kinase activity [IGI]
- regulation of stress fiber assembly [ISO]
- regulation of translation [ISO]
- response to insulin [ISO]
- synapse organization [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
CDK5
AW048668, Crk6
cyclin-dependent kinase 5
GO Process (69)
GO Function (13)
GO Component (17)
Gene Ontology Biological Process
- Schwann cell development [IMP]
- apoptotic process [IDA]
- associative learning [IMP]
- axonogenesis [IMP]
- behavioral response to cocaine [IMP]
- calcium ion import [IMP]
- cell migration [IDA, IMP]
- cell-matrix adhesion [IDA]
- central nervous system neuron development [IMP]
- cerebellar cortex development [IMP]
- cerebellar cortex formation [IMP]
- cerebellum development [IMP]
- cerebral cortex development [IMP]
- corpus callosum development [IMP]
- cortical actin cytoskeleton organization [ISO]
- dendrite morphogenesis [IMP]
- exocytosis [ISO]
- forebrain development [IMP]
- hippocampus development [IMP]
- intracellular protein transport [IMP]
- layer formation in cerebral cortex [IMP]
- motor neuron axon guidance [IMP]
- negative regulation of axon extension [IGI]
- negative regulation of cell cycle [IMP]
- negative regulation of neuron death [ISO]
- negative regulation of protein export from nucleus [IMP]
- negative regulation of protein ubiquitination [IMP]
- negative regulation of proteolysis [ISO]
- negative regulation of synaptic plasticity [IMP]
- negative regulation of transcription, DNA-templated [ISO]
- neuron apoptotic process [IMP, ISO]
- neuron differentiation [IMP, ISA, ISO]
- neuron migration [IMP]
- neuron projection development [ISO]
- neuron projection morphogenesis [ISO]
- nucleocytoplasmic transport [ISO]
- oligodendrocyte differentiation [ISO]
- peptidyl-serine phosphorylation [IDA, IMP, ISO]
- peptidyl-threonine phosphorylation [IDA]
- phosphorylation [ISO]
- positive regulation of calcium ion-dependent exocytosis [IDA]
- positive regulation of neuron apoptotic process [ISO]
- positive regulation of protein binding [IMP]
- positive regulation of protein kinase activity [IMP]
- positive regulation of protein targeting to membrane [IMP]
- positive regulation of receptor activity [IDA]
- protein autophosphorylation [ISO]
- protein localization to synapse [IMP]
- protein phosphorylation [IDA, IGI, IMP, ISO]
- receptor catabolic process [IMP]
- receptor clustering [IMP]
- regulated secretory pathway [ISO]
- regulation of cell cycle [ISO]
- regulation of cell migration [IMP]
- regulation of dendritic spine morphogenesis [IMP]
- regulation of excitatory postsynaptic membrane potential [IMP]
- regulation of postsynaptic membrane potential [IMP]
- regulation of synaptic plasticity [ISO]
- response to cocaine [IMP]
- response to wounding [ISO]
- sensory perception of pain [IMP]
- serine phosphorylation of STAT3 protein [IDA]
- skeletal muscle tissue development [IDA]
- synapse assembly [IMP]
- synaptic transmission, dopaminergic [IMP]
- synaptic transmission, glutamatergic [IMP]
- synaptic vesicle endocytosis [ISO]
- telencephalon development [IMP]
- visual learning [IMP]
Gene Ontology Molecular Function- ErbB-2 class receptor binding [IDA]
- ErbB-3 class receptor binding [IDA]
- acetylcholine receptor activator activity [IDA]
- cyclin-dependent protein serine/threonine kinase activity [ISO]
- cytoskeletal protein binding [ISO]
- ephrin receptor binding [ISO]
- kinase activity [ISO]
- p53 binding [IPI]
- protein binding [IPI]
- protein kinase activity [IDA, IMP, ISO]
- protein kinase binding [ISO]
- protein serine/threonine kinase activity [IDA, ISO]
- tau-protein kinase activity [ISO]
- ErbB-2 class receptor binding [IDA]
- ErbB-3 class receptor binding [IDA]
- acetylcholine receptor activator activity [IDA]
- cyclin-dependent protein serine/threonine kinase activity [ISO]
- cytoskeletal protein binding [ISO]
- ephrin receptor binding [ISO]
- kinase activity [ISO]
- p53 binding [IPI]
- protein binding [IPI]
- protein kinase activity [IDA, IMP, ISO]
- protein kinase binding [ISO]
- protein serine/threonine kinase activity [IDA, ISO]
- tau-protein kinase activity [ISO]
Gene Ontology Cellular Component
- axon [IDA, ISO]
- cell [IMP]
- cyclin-dependent protein kinase 5 holoenzyme complex [ISO]
- cytoplasm [IDA, ISO]
- cytoskeleton [ISO]
- cytosol [IDA]
- dendrite [ISO]
- filopodium [IDA]
- growth cone [ISO]
- intracellular [IMP]
- lamellipodium [IDA]
- membrane [ISO]
- neuromuscular junction [ISO]
- neuronal cell body [ISO]
- nucleolus [IDA]
- nucleus [IDA, ISO]
- postsynaptic density [ISO]
Mus musculus
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.
The postsynaptic density (PSD) contains a collection of scaffold proteins used for assembling synaptic signaling complexes. However, it is not known how the core-scaffold machinery associates in protein-interaction networks or how proteins encoded by genes involved in complex brain disorders are distributed through spatiotemporal protein complexes. Here using immunopurification, proteomics and bioinformatics, we isolated 2,876 proteins across 41 in vivo ... [more]
Nat. Neurosci. Aug. 01, 2017; 20(8);1150-1161 [Pubmed: 28671696]
Throughput
- High Throughput
Additional Notes
- Adult non-postsynaptic density (PSD)
- Adult postsynaptic density (PSD)
Curated By
- BioGRID