AMK2
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
AGO1
Gene Ontology Biological Process
- RNA phosphodiester bond hydrolysis, endonucleolytic [IDA]
- chromatin silencing at centromere [IMP]
- chromatin silencing at silent mating-type cassette [IMP]
- chromatin silencing at telomere [IMP]
- chromatin silencing by small RNA [IMP]
- co-transcriptional gene silencing by RNA interference machinery [IMP]
- conversion of ds siRNA to ss siRNA involved in RNA interference [IMP]
- heterochromatin assembly involved in chromatin silencing by small RNA [IMP]
- mitotic sister chromatid segregation [IGI]
- negative regulation of transcription from RNA polymerase II promoter [IMP]
- regulation of chromatin silencing at centromere [IMP]
- regulation of histone H3-K9 methylation [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Positive Genetic
Mutations/deletions in separate genes, each of which alone causes a minimal phenotype, but when combined in the same cell results in a less severe fitness defect than expected under a given condition. This term is reserved for high or low throughput studies with scores.
Publication
Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes.
The Target of Rapamycin (TOR) signalling network plays important roles in aging and disease. The AMP-activated protein kinase (AMPK) and the Gsk3 kinase inhibit TOR during stress. We performed genetic interaction screens using synthetic genetic arrays (SGA) with gsk3 and amk2 as query mutants, the latter encoding the regulatory subunit of AMPK. We identified 69 negative and 82 positive common ... [more]
Quantitative Score
- 0.348 [Confidence Score]
Throughput
- High Throughput
Ontology Terms
- phenotype: colony size (APO:0000063)
Additional Notes
- SGA was used to quantitatively scoregenetic interactions based on fitness defects estimated from the colony size of double versus single mutants. Genetic interactions were considered significant if they had a score >= 0.15for positive interactions (epistatic or suppressor interactions)and S score <= -0.15for negative interactions (synthetic sick/lethal interactions).
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| AMK2 AGO1 | Negative Genetic Negative Genetic Mutations/deletions in separate genes, each of which alone causes a minimal phenotype, but when combined in the same cell results in a more severe fitness defect or lethality under a given condition. This term is reserved for high or low throughput studies with scores. | High | -5.2232 | BioGRID | 527823 |
Curated By
- BioGRID