BAIT

GLPR

Y75_p3754
DNA-binding transcriptional repressor
GO Process (0)
GO Function (0)
GO Component (0)
Escherichia coli (K12/W3110)
PREY

PEPA

Y75_p4143
aminopeptidase A
GO Process (0)
GO Function (0)
GO Component (0)
Escherichia coli (K12/W3110)

Affinity Capture-MS

An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.

Publication

Global landscape of cell envelope protein complexes in Escherichia coli.

Babu M, Bundalovic-Torma C, Calmettes C, Phanse S, Zhang Q, Jiang Y, Minic Z, Kim S, Mehla J, Gagarinova A, Rodionova I, Kumar A, Guo H, Kagan O, Pogoutse O, Aoki H, Deineko V, Caufield JH, Holtzapple E, Zhang Z, Vastermark A, Pandya Y, Lai CC, El Bakkouri M, Hooda Y, Shah M, Burnside D, Hooshyar M, Vlasblom J, Rajagopala SV, Golshani A, Wuchty S, F Greenblatt J, Saier M, Uetz P, F Moraes T, Parkinson J, Emili A

Bacterial cell envelope protein (CEP) complexes mediate a range of processes, including membrane assembly, antibiotic resistance and metabolic coordination. However, only limited characterization of relevant macromolecules has been reported to date. Here we present a proteomic survey of 1,347 CEPs encompassing 90% inner- and outer-membrane and periplasmic proteins of Escherichia coli. After extraction with non-denaturing detergents, we affinity-purified 785 endogenously ... [more]

Nat. Biotechnol. Nov. 27, 2017; (); [Pubmed: 29176613]

Quantitative Score

  • 6.212556334 [Confidence Score]

Throughput

  • High Throughput

Additional Notes

  • Protein interactions were considered significant if they had a sum of log likelihood scores >= 5.26839785610029, i.e. LLS score >= 5.27.

Curated By

  • BioGRID