BAIT
1600002H07RIK
RIKEN cDNA 1600002H07 gene
GO Process (0)
GO Function (0)
GO Component (0)
Mus musculus
PREY
CAMK2D
2810011D23Rik, 8030469K03Rik, CaMK II, [d]-CaMKII
calcium/calmodulin-dependent protein kinase II, delta
GO Process (30)
GO Function (9)
GO Component (14)
Gene Ontology Biological Process
- G1/S transition of mitotic cell cycle [IMP]
- calcium ion transport [IDA, IMP]
- cardiac muscle cell contraction [ISO, ISS]
- cardiac muscle contraction [IDA]
- cell growth involved in cardiac muscle cell development [ISO]
- cellular potassium ion homeostasis [ISO]
- endoplasmic reticulum calcium ion homeostasis [ISO]
- negative regulation of sodium ion transmembrane transport [ISO]
- negative regulation of sodium ion transmembrane transporter activity [ISO]
- peptidyl-serine phosphorylation [IDA, ISO]
- peptidyl-threonine phosphorylation [ISO, ISS]
- positive regulation of ERK1 and ERK2 cascade [ISO]
- positive regulation of Rac protein signal transduction [ISO]
- positive regulation of cardiac muscle hypertrophy [ISO]
- positive regulation of smooth muscle cell migration [ISO]
- positive regulation of smooth muscle cell proliferation [ISO]
- protein autophosphorylation [IMP, ISO]
- protein oligomerization [ISO]
- protein phosphorylation [ISO]
- regulation of G2/M transition of mitotic cell cycle [ISO]
- regulation of cardiac muscle cell action potential [ISO]
- regulation of cell communication by electrical coupling [ISO]
- regulation of cellular localization [ISO]
- regulation of generation of L-type calcium current [ISO]
- regulation of membrane depolarization [ISO]
- regulation of relaxation of cardiac muscle [IGI, ISO]
- regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [ISO]
- regulation of sodium ion transport [IDA]
- relaxation of cardiac muscle [ISO, ISS]
- response to hypoxia [ISO]
Gene Ontology Molecular Function- calmodulin binding [ISO]
- calmodulin-dependent protein kinase activity [ISO, ISS]
- ion channel binding [IPI, ISO]
- nitric-oxide synthase binding [ISO]
- protein binding [IPI]
- protein homodimerization activity [ISO]
- protein serine/threonine kinase activity [IDA, IMP, ISO]
- sodium channel inhibitor activity [ISO]
- titin binding [ISO]
- calmodulin binding [ISO]
- calmodulin-dependent protein kinase activity [ISO, ISS]
- ion channel binding [IPI, ISO]
- nitric-oxide synthase binding [ISO]
- protein binding [IPI]
- protein homodimerization activity [ISO]
- protein serine/threonine kinase activity [IDA, IMP, ISO]
- sodium channel inhibitor activity [ISO]
- titin binding [ISO]
Gene Ontology Cellular Component
- T-tubule [IDA]
- axon initial segment [IDA]
- calcium channel complex [IDA, ISO]
- cytoplasm [IDA, ISO]
- cytosol [ISO]
- endoplasmic reticulum [ISO]
- intercalated disc [IDA]
- membrane [ISO]
- neuromuscular junction [IDA]
- neuronal cell body [IDA]
- nucleus [IDA, ISO]
- perinuclear region of cytoplasm [ISO]
- protein complex [ISO]
- sarcoplasmic reticulum [IDA]
Mus musculus
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
A CRISPR-based screen for Hedgehog signaling provides insights into ciliary function and ciliopathies.
Primary cilia organize Hedgehog signaling and shape embryonic development, and their dysregulation is the unifying cause of ciliopathies. We conducted a functional genomic screen for Hedgehog signaling by engineering antibiotic-based selection of Hedgehog-responsive cells and applying genome-wide CRISPR-mediated gene disruption. The screen can robustly identify factors required for ciliary signaling with few false positives or false negatives. Characterization of hit ... [more]
Nat. Genet. Mar. 01, 2018; 50(3);460-471 [Pubmed: 29459677]
Throughput
- High Throughput
Curated By
- BioGRID