PTPRZ1
Gene Ontology Biological Process
- axonal fasciculation [IDA]
- axonogenesis [ISO]
- brain development [IEP]
- hematopoietic progenitor cell differentiation [ISO]
- hippocampus development [IEP]
- learning or memory [ISO, ISS]
- negative regulation of cell proliferation [IMP]
- negative regulation of cell-substrate adhesion [IDA]
- negative regulation of dendrite development [IDA]
- neuron development [IEP]
- oligodendrocyte differentiation [IEP, ISO, ISS]
- peptidyl-tyrosine dephosphorylation [IDA, ISO, ISS]
- positive regulation of Schwann cell migration [IMP]
- positive regulation of cell migration [IDA]
- positive regulation of dendrite development [IDA]
- positive regulation of fibroblast proliferation [IDA]
- positive regulation of neuron death [IDA]
- positive regulation of neuron migration [IMP]
- positive regulation of neuron projection development [IMP]
- positive regulation of peptidyl-tyrosine phosphorylation [IDA]
- protein dephosphorylation [IDA]
- regulation of dendrite morphogenesis [IMP]
- regulation of oligodendrocyte progenitor proliferation [ISO, ISS]
- visual learning [IEP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
SCN1A
Gene Ontology Biological Process
- action potential [ISO]
- adult walking behavior [ISO]
- membrane depolarization during action potential [IBA]
- neuromuscular process controlling posture [ISO]
- neuronal action potential [IDA, IMP, ISO, TAS]
- neuronal action potential propagation [ISO]
- regulation of ion transmembrane transport [ISO]
- regulation of membrane potential [ISO]
- sodium ion transmembrane transport [IC, IDA, IMP, ISO, TAS]
- sodium ion transport [ISO]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Reconstituted Complex
An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.
Publication
A sodium channel signaling complex: modulation by associated receptor protein tyrosine phosphatase beta.
Voltage-gated sodium channels in brain neurons were found to associate with receptor protein tyrosine phosphatase beta (RPTPbeta) and its catalytically inactive, secreted isoform phosphacan, and this interaction was regulated during development. Both the extracellular domain and the intracellular catalytic domain of RPTPbeta interacted with sodium channels. Sodium channels were tyrosine phosphorylated and were modulated by the associated catalytic domains of ... [more]
Throughput
- Low Throughput
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| SCN1A PTPRZ1 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | - |
Curated By
- BioGRID