KRAS
Gene Ontology Biological Process
- Fc-epsilon receptor signaling pathway [TAS]
- MAPK cascade [TAS]
- Ras protein signal transduction [TAS]
- activation of MAPKK activity [TAS]
- axon guidance [TAS]
- blood coagulation [TAS]
- epidermal growth factor receptor signaling pathway [TAS]
- fibroblast growth factor receptor signaling pathway [TAS]
- innate immune response [TAS]
- insulin receptor signaling pathway [TAS]
- leukocyte migration [TAS]
- neurotrophin TRK receptor signaling pathway [TAS]
- positive regulation of cell proliferation [IMP]
- positive regulation of gene expression [IMP]
- positive regulation of protein phosphorylation [IMP]
- small GTPase mediated signal transduction [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
SOD1
Gene Ontology Biological Process
- activation of MAPK activity [ISS]
- anterograde axon cargo transport [ISS]
- auditory receptor cell stereocilium organization [ISS]
- blood coagulation [TAS]
- cell aging [IMP]
- cellular iron ion homeostasis [ISS]
- embryo implantation [ISS, NAS]
- glutathione metabolic process [ISS]
- heart contraction [IDA]
- hydrogen peroxide biosynthetic process [IDA, ISS]
- locomotory behavior [ISS]
- muscle cell cellular homeostasis [ISS]
- myeloid cell homeostasis [ISS]
- negative regulation of cholesterol biosynthetic process [IDA]
- negative regulation of neuron apoptotic process [ISS]
- neurofilament cytoskeleton organization [ISS]
- ovarian follicle development [ISS]
- peripheral nervous system myelin maintenance [ISS]
- placenta development [NAS]
- platelet activation [TAS]
- platelet degranulation [TAS]
- positive regulation of apoptotic process [IC]
- positive regulation of catalytic activity [IDA]
- positive regulation of cytokine production [IDA]
- positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway [IMP]
- positive regulation of superoxide anion generation [IDA]
- reactive oxygen species metabolic process [IDA]
- regulation of Rac GTPase activity [IDA]
- regulation of T cell differentiation in thymus [NAS]
- regulation of blood pressure [ISS]
- regulation of mitochondrial membrane potential [IMP]
- regulation of multicellular organism growth [ISS]
- regulation of organ growth [NAS]
- regulation of protein kinase activity [IDA]
- relaxation of vascular smooth muscle [ISS]
- removal of superoxide radicals [IBA, IC, ISS]
- response to axon injury [ISS]
- response to drug [ISS]
- response to ethanol [ISS]
- response to heat [ISS]
- response to hydrogen peroxide [ISS]
- response to organic substance [IDA]
- response to superoxide [IDA]
- retina homeostasis [ISS]
- retrograde axon cargo transport [ISS]
- sensory perception of sound [ISS]
- spermatogenesis [ISS]
- superoxide metabolic process [IDA, ISS]
- thymus development [NAS]
- transmission of nerve impulse [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- cytoplasm [IDA]
- cytoplasmic vesicle [IDA]
- cytosol [IDA, TAS]
- dendrite cytoplasm [IDA]
- extracellular matrix [IDA]
- extracellular region [TAS]
- extracellular space [IDA]
- extracellular vesicular exosome [IDA]
- mitochondrial intermembrane space [TAS]
- mitochondrial matrix [NAS]
- mitochondrion [IDA]
- neuronal cell body [IDA]
- nucleoplasm [IDA]
- nucleus [IDA]
- peroxisome [IDA, ISS]
- plasma membrane [IDA]
- protein complex [IDA]
Synthetic Lethality
A genetic interaction is inferred when mutations or deletions in separate genes, each of which alone causes a minimal phenotype, result in lethality when combined in the same cell under a given condition.
Publication
A Role for Mitochondrial Translation in Promotion of Viability in K-Ras Mutant Cells.
Activating mutations in the KRAS oncogene are highly prevalent in tumors, especially those of the colon, lung, and pancreas. To better understand the genetic dependencies that K-Ras mutant cells rely upon for their growth, we employed whole-genome CRISPR loss-of-function screens in two isogenic pairs of cell lines. Since loss of essential genes is uniformly toxic in CRISPR-based screens, we also ... [more]
Throughput
- High Throughput
Additional Notes
- CRISPR screen analysis showed synthetic lethality with K-Ras mutant in DLD1 cells.
- Gene loss results in the selective reduction of K-Ras mutant cell growth.
- Synthetic lethality score > 1.0.
Related interactions
Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
---|---|---|---|---|---|---|
KRAS SOD1 | Negative Genetic Negative Genetic Mutations/deletions in separate genes, each of which alone causes a minimal phenotype, but when combined in the same cell results in a more severe fitness defect or lethality under a given condition. This term is reserved for high or low throughput studies with scores. | High | - | BioGRID | 3343611 |
Curated By
- BioGRID