BAIT
ATXN1
2900016G23Rik, Atx1, C85907, ENSMUSG00000074917, Gm10786, Sca1
ataxin 1
GO Process (11)
GO Function (8)
GO Component (7)
Gene Ontology Biological Process
- adult locomotory behavior [IMP]
- lung alveolus development [IGI]
- negative regulation of insulin-like growth factor receptor signaling pathway [IMP]
- negative regulation of phosphorylation [IMP]
- negative regulation of transcription from RNA polymerase II promoter [IGI]
- negative regulation of transcription, DNA-templated [ISO]
- nuclear export [ISO]
- positive regulation of glial cell proliferation [IMP]
- positive regulation of transcription from RNA polymerase II promoter [IMP]
- regulation of excitatory postsynaptic membrane potential [IMP]
- visual learning [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
MYH10
5730504C04Rik, 9330167F11Rik, Fltn, Myhn-2, Myhn2, NMHC II-B, NMHC-B, NMHCII-B, NMMHC II-b, NMMHC-B, NMMHC-IIB, SMemb, mKIAA3005, RP23-396M19.2
myosin, heavy polypeptide 10, non-muscle
GO Process (27)
GO Function (6)
GO Component (21)
Gene Ontology Biological Process
- ATP catabolic process [ISO]
- actin cytoskeleton organization [IGI]
- actin filament-based movement [ISO]
- actomyosin structure organization [ISO]
- adult heart development [IMP]
- axon guidance [IMP]
- axonogenesis [IMP]
- brain development [IMP]
- cardiac myofibril assembly [IMP]
- cell proliferation [IMP]
- cerebellar Purkinje cell layer development [IMP]
- exocytosis [IMP]
- fourth ventricle development [IMP]
- in utero embryonic development [IMP]
- lateral ventricle development [IMP]
- mitotic cytokinesis [IMP, ISO]
- myofibril assembly [IMP]
- neuromuscular process controlling balance [IMP]
- neuron migration [IMP]
- neuron projection development [IMP]
- nuclear migration [IMP]
- plasma membrane repair [IMP]
- regulation of cell shape [IMP]
- retina development in camera-type eye [IMP]
- substrate-dependent cell migration, cell extension [IMP]
- third ventricle development [IMP]
- ventricular cardiac muscle cell development [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- actin cytoskeleton [ISO]
- actomyosin [ISO]
- axon [IDA]
- cell cortex [IDA, ISO]
- cleavage furrow [ISO]
- cytoplasm [IDA, ISO]
- dendritic spine [IDA]
- extracellular vesicular exosome [ISO]
- growth cone [IDA]
- midbody [ISO]
- mitochondrion [ISO]
- myosin II complex [IDA, ISO]
- myosin II filament [ISO]
- myosin complex [IDA]
- neuromuscular junction [IDA]
- neuron projection [IDA]
- neuronal cell body [IDA]
- nucleus [ISO]
- plasma membrane [IDA]
- spindle [IDA]
- stress fiber [IDA, IMP, ISO]
Mus musculus
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.
Ataxin-1 mutation, arising from a polyglutamine (polyQ) tract expansion, is the underlying genetic cause of the late-onset neurodegenerative disease Spinocerebellar ataxia type 1 (SCA1). To identify protein partners of polyQ-ataxin-1 in neuronal cells under control or stress conditions, here we report our complementary proteomics strategies of proximity-dependent biotin identification (BioID) and affinity purification (via GFP-Trap pulldown) in Neuro-2a cells expressing ... [more]
Sci Data Dec. 20, 2017; 5(1);180262 [Pubmed: 30457570]
Throughput
- High Throughput
Additional Notes
- ataxin-1[85Q]
- in the presence of Arsenite
Curated By
- BioGRID