BAIT
BDH1
2310032J20Rik, AI327223, Bdh
3-hydroxybutyrate dehydrogenase, type 1
GO Process (1)
GO Function (2)
GO Component (4)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
HDAC6
Hd6, Hdac5, Sfc6, mHDA2, RP23-198C2.1
histone deacetylase 6
GO Process (34)
GO Function (15)
GO Component (19)
Gene Ontology Biological Process
- Hsp90 deacetylation [IMP, ISO]
- aggresome assembly [IGI, ISO]
- cellular response to hydrogen peroxide [ISO]
- cellular response to misfolded protein [IMP]
- cellular response to topologically incorrect protein [ISO]
- histone deacetylation [IDA, ISO]
- intracellular protein transport [ISO]
- lysosome localization [ISO]
- macroautophagy [ISO]
- misfolded or incompletely synthesized protein catabolic process [ISO]
- negative regulation of microtubule depolymerization [IDA]
- negative regulation of protein complex disassembly [ISO]
- negative regulation of proteolysis [ISO]
- peptidyl-lysine deacetylation [ISO]
- polyubiquitinated misfolded protein transport [ISO]
- positive regulation of chaperone-mediated protein complex assembly [ISO]
- positive regulation of epithelial cell migration [ISO]
- positive regulation of hydrogen peroxide-mediated programmed cell death [ISO]
- positive regulation of receptor biosynthetic process [ISO]
- positive regulation of signal transduction [ISO]
- protein complex disassembly [IGI]
- protein deacetylation [IDA, ISO]
- protein polyubiquitination [IDA]
- regulation of establishment of protein localization [IMP]
- regulation of fat cell differentiation [IMP]
- regulation of gene expression, epigenetic [ISO]
- regulation of receptor activity [ISO]
- response to growth factor [ISO]
- response to misfolded protein [ISO]
- response to organic substance [ISO]
- response to toxic substance [ISO]
- tubulin deacetylation [IDA, IMP, ISO]
- ubiquitin-dependent protein catabolic process [IGI, IMP]
- ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [IMP]
Gene Ontology Molecular Function- Hsp90 protein binding [ISO]
- alpha-tubulin binding [ISO]
- beta-catenin binding [ISO]
- beta-tubulin binding [IDA]
- core promoter binding [ISO]
- dynein complex binding [ISO]
- histone deacetylase activity [IDA, ISO]
- histone deacetylase binding [ISO]
- microtubule binding [IDA, ISO]
- polyubiquitin binding [ISO]
- protein binding [IPI]
- tau protein binding [ISO]
- tubulin deacetylase activity [IDA, ISO]
- ubiquitin binding [IDA]
- ubiquitin protein ligase binding [ISO]
- Hsp90 protein binding [ISO]
- alpha-tubulin binding [ISO]
- beta-catenin binding [ISO]
- beta-tubulin binding [IDA]
- core promoter binding [ISO]
- dynein complex binding [ISO]
- histone deacetylase activity [IDA, ISO]
- histone deacetylase binding [ISO]
- microtubule binding [IDA, ISO]
- polyubiquitin binding [ISO]
- protein binding [IPI]
- tau protein binding [ISO]
- tubulin deacetylase activity [IDA, ISO]
- ubiquitin binding [IDA]
- ubiquitin protein ligase binding [ISO]
Gene Ontology Cellular Component
- aggresome [ISO]
- axon [IDA, ISO]
- caveola [ISO]
- cell leading edge [ISO]
- centrosome [ISO]
- cytoplasm [IDA]
- cytoplasmic microtubule [IDA]
- cytosol [IDA]
- dendrite [IDA]
- dynein complex [ISO]
- histone deacetylase complex [ISO]
- inclusion body [ISO]
- microtubule [ISO]
- microtubule associated complex [ISO]
- nucleoplasm [ISO]
- nucleus [IDA, TAS]
- perikaryon [IDA]
- perinuclear region of cytoplasm [ISO]
- protein complex [IPI]
Mus musculus
Co-fractionation
Interaction inferred from the presence of two or more protein subunits in a partially purified protein preparation. If co-fractionation is demonstrated between 3 or more proteins, then add them as a complex.
Publication
BraInMap Elucidates the Macromolecular Connectivity Landscape of Mammalian Brain.
Connectivity webs mediate the unique biology of the mammalian brain. Yet, while cell circuit maps are increasingly available, knowledge of their underlying molecular networks remains limited. Here, we applied multi-dimensional biochemical fractionation with mass spectrometry and machine learning to survey endogenous macromolecules across the adult mouse brain. We defined a global "interactome" comprising over one thousand multi-protein complexes. These include ... [more]
Cell Syst Apr. 22, 2020; 10(4);333-350.e14 [Pubmed: 32325033]
Quantitative Score
- 0.75 [EPIC Score]
Throughput
- High Throughput
Additional Notes
- High confidence interactions had an EPIC Score >= 0.683
Curated By
- BioGRID