BAIT
EXOSC3
PCH1B, RRP40, Rrp40p, bA3J10.7, hRrp-40, p10, CGI-102
exosome component 3
GO Process (16)
GO Function (4)
GO Component (8)
Gene Ontology Biological Process
- CUT catabolic process [IMP]
- DNA deamination [IDA]
- RNA metabolic process [TAS]
- U4 snRNA 3'-end processing [IBA]
- exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay [IMP, TAS]
- exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IBA]
- gene expression [TAS]
- isotype switching [ISS]
- mRNA metabolic process [TAS]
- nuclear polyadenylation-dependent rRNA catabolic process [IBA]
- nuclear polyadenylation-dependent tRNA catabolic process [IBA]
- nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription [IBA]
- nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [TAS]
- nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' [IBA]
- polyadenylation-dependent snoRNA 3'-end processing [IBA]
- rRNA processing [IDA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
TSR2
DT1P1A10, WGG1, RP1-112K5.2
TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
GO Process (1)
GO Function (1)
GO Component (1)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Homo sapiens
Two-hybrid
Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation.
Publication
A reference map of the human binary protein interactome.
Global insights into cellular organization and genome function require comprehensive understanding of the interactome networks that mediate genotype-phenotype relationships1,2. Here we present a human 'all-by-all' reference interactome map of human binary protein interactions, or 'HuRI'. With approximately 53,000 protein-protein interactions, HuRI has approximately four times as many such interactions as there are high-quality curated interactions from small-scale studies. The integration ... [more]
Nature Apr. 01, 2020; 580(7803);402-408 [Pubmed: 32296183]
Throughput
- High Throughput
Additional Notes
- This human reference interactome (HuRI) was generated by performing nine two-hybrid screens with the high confidence interactions determined by pairwise verification by quadruplicate retesting and sequence confirmation. This HI-III-20 dataset contains over 52,000 PPIs involving more than 8,000 proteins.
Curated By
- BioGRID