BAIT
SALL1
Msal-3
sal-like 1 (Drosophila)
GO Process (35)
GO Function (10)
GO Component (5)
Gene Ontology Biological Process
- branching involved in ureteric bud morphogenesis [IMP]
- embryonic digestive tract development [ISO]
- embryonic digit morphogenesis [IMP, ISO]
- forelimb morphogenesis [IGI]
- heart development [ISO]
- hindlimb morphogenesis [IGI]
- inductive cell-cell signaling [IMP]
- kidney development [ISO]
- kidney epithelium development [IMP]
- limb development [ISO]
- mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis [IMP]
- mesenchymal to epithelial transition involved in metanephros morphogenesis [IMP]
- negative regulation of ectoderm development [IMP]
- negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis [IMP]
- negative regulation of mesoderm development [IMP]
- negative regulation of smoothened signaling pathway [IGI]
- negative regulation of transcription from RNA polymerase II promoter [IDA, IGI, IMP, ISO]
- negative regulation of transcription, DNA-templated [IDA, IMP, ISO]
- neural tube closure [IGI]
- neural tube development [IGI]
- olfactory bulb development [IMP]
- olfactory bulb interneuron differentiation [IMP]
- olfactory bulb mitral cell layer development [ISO]
- olfactory nerve development [IMP]
- outer ear morphogenesis [ISO]
- positive regulation of Wnt signaling pathway [ISO]
- positive regulation of branching involved in ureteric bud morphogenesis [IMP]
- positive regulation of neuron differentiation [IMP]
- positive regulation of transcription from RNA polymerase II promoter [IDA, IMP, ISO]
- positive regulation of transcription, DNA-templated [ISO]
- regulation of neural precursor cell proliferation [IMP]
- transcription from RNA polymerase II promoter [IDA]
- ureteric bud development [IMP]
- ureteric bud invasion [IMP]
- ventricular septum development [IGI, IMP]
Gene Ontology Molecular Function- DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription [IDA]
- RNA polymerase II transcription coactivator activity [IDA]
- RNA polymerase II transcription factor binding [IPI]
- beta-catenin binding [ISO]
- chromatin binding [IDA]
- enhancer sequence-specific DNA binding [IDA]
- histone deacetylase activity [IMP]
- protein binding [IPI]
- DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription [IDA]
- RNA polymerase II transcription coactivator activity [IDA]
- RNA polymerase II transcription factor binding [IPI]
- beta-catenin binding [ISO]
- chromatin binding [IDA]
- enhancer sequence-specific DNA binding [IDA]
- histone deacetylase activity [IMP]
- protein binding [IPI]
Gene Ontology Cellular Component
- NuRD complex [IDA]
- chromocenter [ISO]
- cytoplasm [ISO]
- heterochromatin [IDA, ISO]
- nucleus [IC, IDA, ISO]
Mus musculus
PREY
HDAC1
HD1, Hdac1-ps, MommeD5, RPD3, RP23-209C6.7
histone deacetylase 1
GO Process (42)
GO Function (24)
GO Component (16)
Gene Ontology Biological Process
- ATP-dependent chromatin remodeling [ISO]
- cellular response to oxidative stress [ISO]
- chromatin modification [TAS]
- circadian regulation of gene expression [IDA]
- circadian rhythm [IDA]
- embryonic digit morphogenesis [IGI]
- endoderm development [IDA, IMP]
- epidermal cell differentiation [IGI]
- eyelid development in camera-type eye [IGI]
- fungiform papilla formation [IGI]
- hair follicle placode formation [IGI]
- hippocampus development [IGI]
- histone H3 deacetylation [IDA, ISO]
- histone H4 deacetylation [IDA, ISO]
- histone deacetylation [ISO]
- negative regulation by host of viral transcription [ISO]
- negative regulation of I-kappaB kinase/NF-kappaB signaling [IGI]
- negative regulation of androgen receptor signaling pathway [ISO]
- negative regulation of apoptotic process [IGI]
- negative regulation of canonical Wnt signaling pathway [IGI]
- negative regulation of cell proliferation [ISO]
- negative regulation of insulin secretion [ISO]
- negative regulation of intrinsic apoptotic signaling pathway [IGI]
- negative regulation of neuron apoptotic process [ISO]
- negative regulation of peptidyl-lysine acetylation [ISO]
- negative regulation of transcription from RNA polymerase II promoter [IDA, IGI, ISO]
- negative regulation of transcription, DNA-templated [IDA, ISO]
- neuron differentiation [IGI]
- odontogenesis of dentin-containing tooth [IGI]
- positive regulation of cell proliferation [IGI, ISO]
- positive regulation of chemokine (C-X-C motif) ligand 2 production [ISO]
- positive regulation of interleukin-1 production [ISO]
- positive regulation of oligodendrocyte differentiation [IGI, ISO]
- positive regulation of receptor biosynthetic process [ISO]
- positive regulation of transcription from RNA polymerase II promoter [ISO]
- positive regulation of transcription, DNA-templated [ISO]
- positive regulation of tumor necrosis factor production [ISO]
- positive regulation of type B pancreatic cell apoptotic process [ISO]
- positive regulation of tyrosine phosphorylation of Stat3 protein [ISO]
- protein deacetylation [ISO]
- response to amphetamine [ISO]
- transcription from RNA polymerase II promoter [ISO]
Gene Ontology Molecular Function- DNA binding [IDA]
- Krueppel-associated box domain binding [IPI]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [ISO]
- RNA polymerase II distal enhancer sequence-specific DNA binding [ISO]
- RNA polymerase II repressing transcription factor binding [IPI, ISO]
- RNA polymerase II transcription corepressor activity [ISO]
- activating transcription factor binding [ISO]
- chromatin binding [IDA, ISO]
- core promoter binding [IDA, ISO]
- deacetylase activity [IDA]
- enzyme binding [ISO]
- histone deacetylase activity [IDA, ISO]
- histone deacetylase binding [ISO]
- nucleosomal DNA binding [ISO]
- protein N-terminus binding [ISO]
- protein binding [IPI]
- protein complex binding [ISO]
- protein deacetylase activity [ISO]
- repressing transcription factor binding [ISO]
- sequence-specific DNA binding transcription factor activity [IDA]
- transcription corepressor activity [IDA]
- transcription factor binding [ISO, TAS]
- transcription regulatory region DNA binding [ISO]
- transcription regulatory region sequence-specific DNA binding [IDA]
- DNA binding [IDA]
- Krueppel-associated box domain binding [IPI]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [ISO]
- RNA polymerase II distal enhancer sequence-specific DNA binding [ISO]
- RNA polymerase II repressing transcription factor binding [IPI, ISO]
- RNA polymerase II transcription corepressor activity [ISO]
- activating transcription factor binding [ISO]
- chromatin binding [IDA, ISO]
- core promoter binding [IDA, ISO]
- deacetylase activity [IDA]
- enzyme binding [ISO]
- histone deacetylase activity [IDA, ISO]
- histone deacetylase binding [ISO]
- nucleosomal DNA binding [ISO]
- protein N-terminus binding [ISO]
- protein binding [IPI]
- protein complex binding [ISO]
- protein deacetylase activity [ISO]
- repressing transcription factor binding [ISO]
- sequence-specific DNA binding transcription factor activity [IDA]
- transcription corepressor activity [IDA]
- transcription factor binding [ISO, TAS]
- transcription regulatory region DNA binding [ISO]
- transcription regulatory region sequence-specific DNA binding [IDA]
Gene Ontology Cellular Component
- NuRD complex [IDA, IPI, ISO]
- Sin3 complex [ISO]
- chromatin [ISO]
- cytoplasm [TAS]
- cytosol [ISO]
- heterochromatin [IDA]
- histone deacetylase complex [IPI, TAS]
- neuron projection [ISO]
- neuronal cell body [IDA]
- nuclear chromatin [IDA, ISO]
- nucleoplasm [ISO]
- nucleus [IDA, ISO]
- perinuclear region of cytoplasm [ISO]
- protein complex [IDA, ISO]
- transcription factor complex [IDA, IPI]
- transcriptional repressor complex [IPI]
Mus musculus
Reconstituted Complex
An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.
Publication
Murine Sall1 represses transcription by recruiting a histone deacetylase complex.
The multi-zinc finger proteins of the Sal family regulate organogenesis. Genetic evidence from Drosophila has shown that spalt (sal) can alter gene expression in a cell autonomous fashion, but Sal proteins have never been directly analyzed for their ability to activate or repress transcription. In this report, we show that a member of the Sal family, mouse Sall1, is a ... [more]
J. Biol. Chem. Apr. 26, 2002; 277(17);14869-76 [Pubmed: 11836251]
Throughput
- Low Throughput
Curated By
- BioGRID