BAIT
HK1
HK1-ta, HK1-tb, HK1-tc, HKD, HKI, HMSNR, HXK1
hexokinase 1
GO Process (9)
GO Function (5)
GO Component (2)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
RSF1
HBXAP, RSF-1, XAP8, p325
remodeling and spacing factor 1
GO Process (9)
GO Function (3)
GO Component (3)
Gene Ontology Biological Process
- CENP-A containing nucleosome assembly [TAS]
- DNA-templated transcription, initiation [IDA]
- chromatin remodeling [IDA]
- negative regulation of DNA binding [IDA]
- negative regulation of transcription, DNA-templated [IDA]
- nucleosome assembly [IDA, TAS]
- nucleosome positioning [IDA]
- positive regulation of transcription, DNA-templated [IDA]
- positive regulation of viral transcription [IDA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- RSF complex [IPI]
- nucleoplasm [IDA, TAS]
- nucleus [IDA]
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei.
Cells organize their actions partly through tightly controlled protein-protein interactions-collectively termed the interactome. Here we use crosslinking mass spectrometry (XL-MS) to chart the protein-protein interactions in intact human nuclei. Overall, we identified ∼8,700 crosslinks, of which 2/3 represent links connecting distinct proteins. From these data, we gain insights on interactions involving histone proteins. We observed that core histones on the ... [more]
Mol. Cell Proteomics Dec. 01, 2017; 17(10);2018-2033 [Pubmed: 30021884]
Throughput
- High Throughput
Additional Notes
- interaction identified using XL-MS (cross-linking mass spectrometry): lysates from unfractionated cells were treated with cross-linker and cross-linked proteins were identified by mass-spectrometry; interaction is undirectional; therefore bait and prey/hit have been assigned arbitrarily; interactions with FDRs (false discovery rates) of 1% or less were reported; this interaction was not detected in parallel experiments using TX100-soluble or TX100-insoluble fractions
Curated By
- BioGRID