BAIT
VIM
CTRCT30, HEL113, RP11-124N14.1
vimentin
GO Process (4)
GO Function (7)
GO Component (9)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
ADRA1A
ADRA1C, ADRA1L1, ALPHA1AAR
adrenoceptor alpha 1A
GO Process (22)
GO Function (2)
GO Component (4)
Gene Ontology Biological Process
- G-protein coupled receptor signaling pathway [TAS]
- activation of phospholipase C activity [ISS]
- adrenergic receptor signaling pathway [ISS, NAS, TAS]
- aging [ISS]
- apoptotic process [TAS]
- calcium ion transport into cytosol [ISS]
- cell-cell signaling [TAS]
- intracellular signal transduction [TAS]
- negative regulation of Rho protein signal transduction [ISS]
- negative regulation of cell proliferation [TAS]
- positive regulation of ERK1 and ERK2 cascade [ISS]
- positive regulation of MAPK cascade [IDA]
- positive regulation of action potential [ISS]
- positive regulation of cardiac muscle contraction [ISS]
- positive regulation of cytosolic calcium ion concentration [ISS]
- positive regulation of protein kinase C signaling [ISS]
- positive regulation of synaptic transmission, GABAergic [ISS]
- positive regulation of vasoconstriction [ISS]
- response to drug [ISS]
- response to hormone [ISS]
- signal transduction [TAS]
- smooth muscle contraction [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei.
Cells organize their actions partly through tightly controlled protein-protein interactions-collectively termed the interactome. Here we use crosslinking mass spectrometry (XL-MS) to chart the protein-protein interactions in intact human nuclei. Overall, we identified ∼8,700 crosslinks, of which 2/3 represent links connecting distinct proteins. From these data, we gain insights on interactions involving histone proteins. We observed that core histones on the ... [more]
Mol. Cell Proteomics Dec. 01, 2017; 17(10);2018-2033 [Pubmed: 30021884]
Throughput
- High Throughput
Additional Notes
- interaction identified using XL-MS (cross-linking mass spectrometry): TX100-insoluble fractions from cells were treated with cross-linker and cross-linked proteins were identified by mass-spectrometry; interaction is undirectional; therefore bait and prey/hit have been assigned arbitrarily; interactions with FDRs (false discovery rates) of 1% or less were reported; this interaction was not detected in parallel experiments using unfractionated cells or TX100-soluble fractions
Curated By
- BioGRID