SOX2
Gene Ontology Biological Process
- adenohypophysis development [IMP]
- anatomical structure formation involved in morphogenesis [IMP]
- cell cycle arrest [ISO]
- cell fate commitment [IDA]
- cell fate specification [IMP]
- cerebral cortex development [IMP]
- detection of mechanical stimulus involved in equilibrioception [IMP]
- detection of mechanical stimulus involved in sensory perception of sound [IMP]
- diencephalon morphogenesis [IMP]
- embryonic organ development [IMP]
- endodermal cell fate specification [ISO]
- epithelial tube branching involved in lung morphogenesis [IDA]
- forebrain neuron differentiation [IMP]
- inner ear morphogenesis [IMP]
- lens induction in camera-type eye [IGI]
- lung alveolus development [IDA]
- male genitalia development [IMP]
- negative regulation of Wnt signaling pathway [IGI]
- negative regulation of canonical Wnt signaling pathway [IDA, ISO]
- negative regulation of cell differentiation [IMP]
- negative regulation of epithelial cell proliferation [ISO]
- negative regulation of neuron differentiation [IDA]
- negative regulation of osteoblast differentiation [IDA]
- negative regulation of transcription from RNA polymerase II promoter [IGI]
- neuron fate commitment [IMP]
- neuronal stem cell maintenance [IGI]
- olfactory placode formation [IGI]
- osteoblast differentiation [ISO]
- pigment biosynthetic process [IMP]
- positive regulation of MAPK cascade [ISO]
- positive regulation of Notch signaling pathway [IDA]
- positive regulation of cell differentiation [ISO]
- positive regulation of cell-cell adhesion [ISO]
- positive regulation of epithelial cell differentiation [IDA]
- positive regulation of neuroblast proliferation [IMP]
- positive regulation of neuron differentiation [IMP]
- positive regulation of transcription from RNA polymerase II promoter [IDA, IGI, IMP, ISO]
- positive regulation of transcription, DNA-templated [ISO]
- regulation of cysteine-type endopeptidase activity involved in apoptotic process [ISO]
- regulation of gene expression [ISO]
- regulation of neurogenesis [IGI]
- regulation of transcription from RNA polymerase II promoter [IDA]
- regulation of transcription, DNA-templated [IDA, ISO]
- response to growth factor [ISO]
- response to organic substance [IDA]
- response to retinoic acid [IDA]
- retina morphogenesis in camera-type eye [IMP]
- sensory perception of sound [IMP]
- somatic stem cell maintenance [ISO]
- stem cell differentiation [IDA]
- stem cell maintenance [IMP]
- tongue development [IMP]
- transcription from RNA polymerase II promoter [IDA]
Gene Ontology Molecular Function- DNA binding [IDA, IGI, ISO]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [ISO]
- chromatin binding [IDA]
- miRNA binding [ISO]
- protein binding [IPI]
- protein heterodimerization activity [IDA]
- sequence-specific DNA binding [IDA, ISO]
- sequence-specific DNA binding RNA polymerase II transcription factor activity [IDA]
- sequence-specific DNA binding transcription factor activity [IDA, ISO]
- transcription factor binding [IPI]
- transcription regulatory region DNA binding [IDA, ISO]
- transcription regulatory region sequence-specific DNA binding [ISO]
- DNA binding [IDA, IGI, ISO]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [ISO]
- chromatin binding [IDA]
- miRNA binding [ISO]
- protein binding [IPI]
- protein heterodimerization activity [IDA]
- sequence-specific DNA binding [IDA, ISO]
- sequence-specific DNA binding RNA polymerase II transcription factor activity [IDA]
- sequence-specific DNA binding transcription factor activity [IDA, ISO]
- transcription factor binding [IPI]
- transcription regulatory region DNA binding [IDA, ISO]
- transcription regulatory region sequence-specific DNA binding [ISO]
Gene Ontology Cellular Component
CBX1
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Interaction of Sox2 with RNA binding proteins in mouse embryonic stem cells.
Sox2 is a master transcriptional regulator of embryonic development. In this study, we determined the protein interactome of Sox2 in the chromatin and nucleoplasm of mouse embryonic stem (mES) cells. Apart from canonical interactions with pluripotency-regulating transcription factors, we identified interactions with several chromatin modulators, including members of the heterochromatin protein 1 (HP1) family, suggesting a role for Sox2 in ... [more]
Throughput
- High Throughput
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| CBX1 SOX2 | Reconstituted Complex Reconstituted Complex An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator. | Low | - | BioGRID | - |
Curated By
- BioGRID