BAIT
UNK
ZC3H5, ZC3HDC5
unkempt family zinc finger
GO Process (0)
GO Function (1)
GO Component (0)
Gene Ontology Molecular Function
Homo sapiens
PREY
SYNJ1
INPP5G, PARK20
synaptojanin 1
GO Process (15)
GO Function (3)
GO Component (2)
Gene Ontology Biological Process
- inositol phosphate dephosphorylation [ISS]
- inositol phosphate metabolic process [TAS]
- neurotransmitter transport [ISS]
- phosphate-containing compound metabolic process [TAS]
- phosphatidylinositol biosynthetic process [TAS]
- phosphatidylinositol dephosphorylation [ISS]
- phosphatidylinositol metabolic process [ISS]
- phospholipid metabolic process [TAS]
- positive regulation of synaptic vesicle uncoating [TAS]
- regulation of synaptic vesicle membrane organization [TAS]
- small molecule metabolic process [TAS]
- synaptic vesicle endocytosis [ISS]
- synaptic vesicle priming [ISS]
- synaptic vesicle transport [ISS]
- synaptic vesicle uncoating [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
High-Density Proximity Mapping Reveals the Subcellular Organization of mRNA-Associated Granules and Bodies.
mRNA processing, transport, translation, and ultimately degradation involve a series of dedicated protein complexes that often assemble into large membraneless structures such as stress granules (SGs) and processing bodies (PBs). Here, systematic in vivo proximity-dependent biotinylation (BioID) analysis of 119 human proteins associated with different aspects of mRNA biology uncovers 7424 unique proximity interactions with 1,792 proteins. Classical bait-prey analysis reveals ... [more]
Mol. Cell Dec. 01, 2017; 69(3);517-532.e11 [Pubmed: 29395067]
Throughput
- Low Throughput
Additional Notes
- BioID
- High confidence interactions had a SAINTexpress score or AvgP >= 0.95.
Curated By
- BioGRID