BAIT
MYO9B
myosin IXb
GO Process (8)
GO Function (14)
GO Component (10)
Gene Ontology Biological Process
Gene Ontology Molecular Function- ADP binding [IDA, IMP, ISO]
- ATP binding [IDA, IMP, ISO]
- ATP-dependent protein binding [IDA]
- ATPase activity [IDA, IMP, ISO]
- GTPase activator activity [IDA]
- Rho GTPase activator activity [IMP, ISO]
- actin binding [IDA, ISO]
- actin filament binding [IDA, IMP]
- actin-dependent ATPase activity [IDA, IMP]
- calmodulin binding [ISO]
- microfilament motor activity [ISO]
- protein binding [IPI]
- protein homodimerization activity [ISO]
- zinc ion binding [IDA]
- ADP binding [IDA, IMP, ISO]
- ATP binding [IDA, IMP, ISO]
- ATP-dependent protein binding [IDA]
- ATPase activity [IDA, IMP, ISO]
- GTPase activator activity [IDA]
- Rho GTPase activator activity [IMP, ISO]
- actin binding [IDA, ISO]
- actin filament binding [IDA, IMP]
- actin-dependent ATPase activity [IDA, IMP]
- calmodulin binding [ISO]
- microfilament motor activity [ISO]
- protein binding [IPI]
- protein homodimerization activity [ISO]
- zinc ion binding [IDA]
Gene Ontology Cellular Component
Rattus norvegicus
PREY
LDHB
HEL-S-281, LDH-B, LDH-H, LDHBD, TRG-5
lactate dehydrogenase B
GO Process (3)
GO Function (1)
GO Component (4)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Systems analysis of RhoGEF and RhoGAP regulatory proteins reveals spatially organized RAC1 signalling from integrin adhesions.
Rho GTPases are central regulators of the cytoskeleton and, in humans, are controlled by 145 multidomain guanine nucleotide exchange factors (RhoGEFs) and GTPase-activating proteins (RhoGAPs). How Rho signalling patterns are established in dynamic cell spaces to control cellular morphogenesis is unclear. Through a family-wide characterization of substrate specificities, interactomes and localization, we reveal at the systems level how RhoGEFs and ... [more]
Nat. Cell Biol. Dec. 01, 2019; 22(4);498-511 [Pubmed: 32203420]
Quantitative Score
- 6.372363517 [CompPASS Z-score]
Throughput
- High Throughput
Additional Notes
- prey proteins were classified into confidence-level categories of gold (highest confidence), silver or bronze based on various criteria
- tagged bait proteins were affinity purified and associated proteins identified by mass spectrometry
- the score provided is the CompPASS Z-score
- this interaction was classified by the authors as being in the gold list
Curated By
- BioGRID