BAIT
FKBP8
FKBP38, FKBPr38
FK506 binding protein 8, 38kDa
GO Process (3)
GO Function (4)
GO Component (2)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
PDE3B
HcGIP1, cGIPDE1
phosphodiesterase 3B, cGMP-inhibited
GO Process (9)
GO Function (4)
GO Component (5)
Gene Ontology Biological Process
- blood coagulation [TAS]
- cAMP catabolic process [IEP]
- cellular response to insulin stimulus [ISS]
- insulin receptor signaling pathway [TAS]
- negative regulation of angiogenesis [IMP]
- negative regulation of cAMP-mediated signaling [IC]
- negative regulation of cell adhesion [IMP]
- negative regulation of cell adhesion mediated by integrin [IC]
- negative regulation of lipid catabolic process [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
A High-Density Human Mitochondrial Proximity Interaction Network.
We used BioID, a proximity-dependent biotinylation assay with 100 mitochondrial baits from all mitochondrial sub-compartments, to create a high-resolution human mitochondrial proximity interaction network. We identified 1,465 proteins, producing 15,626 unique high-confidence proximity interactions. Of these, 528 proteins were previously annotated as mitochondrial, nearly half of the mitochondrial proteome defined by Mitocarta 2.0. Bait-bait analysis showed a clear separation of ... [more]
Cell Metab. Sep. 01, 2020; 32(3);479-497.e9 [Pubmed: 32877691]
Quantitative Score
- 0.97 [Saint Score]
Throughput
- High Throughput
Additional Notes
- interaction assayed using BioID
- interactions were considered high confidence if they had a Bayesian False Discovery Rate of 1% or less
- the Saint Score for the interaction (or the maximum of any bait-prey combinations that had multiple scores) is shown
Curated By
- BioGRID