BAIT
RMDN3
FAM82A2, FAM82C, RMD-3, RMD3, ptpip51, hucep-10
regulator of microtubule dynamics 3
GO Process (1)
GO Function (1)
GO Component (2)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
DAPK3
DLK, ZIP, ZIPK
death-associated protein kinase 3
GO Process (18)
GO Function (8)
GO Component (1)
Gene Ontology Biological Process
- apoptotic process [IDA, IMP]
- cellular response to interferon-gamma [IDA]
- cytokinesis [TAS]
- intracellular signal transduction [IDA]
- negative regulation of translation [IDA]
- positive regulation of apoptotic process [IDA]
- positive regulation of canonical Wnt signaling pathway [IMP]
- protein autophosphorylation [IDA, TAS]
- protein phosphorylation [IDA]
- regulation of actin cytoskeleton reorganization [IDA, TAS]
- regulation of apoptotic process [IBA, TAS]
- regulation of autophagy [TAS]
- regulation of cell motility [TAS]
- regulation of focal adhesion assembly [IDA]
- regulation of mitosis [TAS]
- regulation of mitotic cell cycle [IMP]
- regulation of smooth muscle contraction [TAS]
- regulation of transcription, DNA-templated [TAS]
Gene Ontology Molecular Function
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
A High-Density Human Mitochondrial Proximity Interaction Network.
We used BioID, a proximity-dependent biotinylation assay with 100 mitochondrial baits from all mitochondrial sub-compartments, to create a high-resolution human mitochondrial proximity interaction network. We identified 1,465 proteins, producing 15,626 unique high-confidence proximity interactions. Of these, 528 proteins were previously annotated as mitochondrial, nearly half of the mitochondrial proteome defined by Mitocarta 2.0. Bait-bait analysis showed a clear separation of ... [more]
Cell Metab. Sep. 01, 2020; 32(3);479-497.e9 [Pubmed: 32877691]
Quantitative Score
- 1.0 [Saint Score]
Throughput
- High Throughput
Additional Notes
- interaction assayed using BioID
- interactions were considered high confidence if they had a Bayesian False Discovery Rate of 1% or less
- the Saint Score for the interaction (or the maximum of any bait-prey combinations that had multiple scores) is shown
Curated By
- BioGRID