BAIT
HNRNPH1
HNRPH, HNRPH1, hnRNPH
heterogeneous nuclear ribonucleoprotein H1 (H)
GO Process (5)
GO Function (4)
GO Component (4)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
UBE2B
E2-17kDa, HHR6B, HR6B, RAD6B, UBC2
ubiquitin-conjugating enzyme E2B
GO Process (19)
GO Function (5)
GO Component (6)
Gene Ontology Biological Process
- DNA repair [IGI]
- canonical Wnt signaling pathway [ISS]
- cellular response to DNA damage stimulus [IDA]
- histone H2A ubiquitination [IMP]
- negative regulation of cAMP-mediated signaling [IDA]
- postreplication repair [IDA, NAS]
- proteasome-mediated ubiquitin-dependent protein catabolic process [IDA]
- protein K11-linked ubiquitination [IDA]
- protein K48-linked ubiquitination [IDA]
- protein K63-linked ubiquitination [IDA]
- protein autoubiquitination [IDA]
- protein monoubiquitination [IMP]
- protein polyubiquitination [IMP]
- protein stabilization [IMP]
- protein ubiquitination [IDA]
- response to UV [IGI]
- response to drug [IDA]
- spermatogenesis [TAS]
- ubiquitin-dependent protein catabolic process [IDA, NAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-RNA
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and associated RNA species identified by Northern blot, RT-PCR, affinity labeling, sequencing, or microarray analysis.
Publication
High-throughput analyses of hnRNP H1 dissects its multi-functional aspect.
hnRNPs are polyvalent RNA binding proteins that have been implicated in a range of regulatory roles including splicing, mRNA decay, translation, and miRNA metabolism. A variety of genome wide studies have taken advantage of methods like CLIP and RIP to identify the targets and binding sites of RNA binding proteins. However, due to the complex nature of RNA-binding proteins, these ... [more]
RNA Biol Jan. 14, 2016; 13(4);400-11 [Pubmed: 26760575]
Throughput
- High Throughput
Additional Notes
- RIP-Seq
- iCLIP
Curated By
- BioGRID