BAIT
HNRNPH1
HNRPH, HNRPH1, hnRNPH
heterogeneous nuclear ribonucleoprotein H1 (H)
GO Process (5)
GO Function (4)
GO Component (4)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
HIPK2
PRO0593
homeodomain interacting protein kinase 2
GO Process (21)
GO Function (8)
GO Component (4)
Gene Ontology Biological Process
- DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator [IDA]
- PML body organization [TAS]
- SMAD protein signal transduction [IDA]
- cellular response to hypoxia [TAS]
- erythrocyte differentiation [ISS]
- eye development [ISS]
- intrinsic apoptotic signaling pathway [NAS]
- intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [TAS]
- modulation by virus of host morphology or physiology [NAS]
- negative regulation of BMP signaling pathway [IMP]
- peptidyl-serine phosphorylation [ISS]
- peptidyl-threonine phosphorylation [ISS]
- positive regulation of JNK cascade [IMP]
- positive regulation of angiogenesis [IDA]
- positive regulation of protein binding [ISS]
- positive regulation of sequence-specific DNA binding transcription factor activity [ISS]
- positive regulation of transcription from RNA polymerase II promoter [ISS]
- positive regulation of transcription, DNA-templated [IMP]
- positive regulation of transforming growth factor beta receptor signaling pathway [IMP]
- protein phosphorylation [IDA]
- regulation of cell cycle [TAS]
Gene Ontology Molecular Function
Homo sapiens
Affinity Capture-RNA
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and associated RNA species identified by Northern blot, RT-PCR, affinity labeling, sequencing, or microarray analysis.
Publication
High-throughput analyses of hnRNP H1 dissects its multi-functional aspect.
hnRNPs are polyvalent RNA binding proteins that have been implicated in a range of regulatory roles including splicing, mRNA decay, translation, and miRNA metabolism. A variety of genome wide studies have taken advantage of methods like CLIP and RIP to identify the targets and binding sites of RNA binding proteins. However, due to the complex nature of RNA-binding proteins, these ... [more]
RNA Biol Jan. 14, 2016; 13(4);400-11 [Pubmed: 26760575]
Throughput
- High Throughput
Additional Notes
- RIP-Seq
- iCLIP
Curated By
- BioGRID