BAIT
HNRNPH1
HNRPH, HNRPH1, hnRNPH
heterogeneous nuclear ribonucleoprotein H1 (H)
GO Process (5)
GO Function (4)
GO Component (4)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
SIK1
MSK, SIK, SNF1LK
salt-inducible kinase 1
GO Process (13)
GO Function (7)
GO Component (2)
Gene Ontology Biological Process
- cardiac muscle cell differentiation [ISS]
- entrainment of circadian clock by photoperiod [ISS]
- intracellular signal transduction [IDA, ISS]
- negative regulation of CREB transcription factor activity [ISS]
- negative regulation of gluconeogenesis [ISS]
- negative regulation of triglyceride biosynthetic process [ISS]
- positive regulation of anoikis [IMP]
- protein autophosphorylation [IDA]
- protein phosphorylation [IDA, ISS]
- regulation of cell differentiation [ISS]
- regulation of mitotic cell cycle [ISS]
- regulation of myotube differentiation [ISS]
- regulation of sodium ion transport [ISS]
Gene Ontology Molecular Function
Homo sapiens
Affinity Capture-RNA
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and associated RNA species identified by Northern blot, RT-PCR, affinity labeling, sequencing, or microarray analysis.
Publication
High-throughput analyses of hnRNP H1 dissects its multi-functional aspect.
hnRNPs are polyvalent RNA binding proteins that have been implicated in a range of regulatory roles including splicing, mRNA decay, translation, and miRNA metabolism. A variety of genome wide studies have taken advantage of methods like CLIP and RIP to identify the targets and binding sites of RNA binding proteins. However, due to the complex nature of RNA-binding proteins, these ... [more]
RNA Biol Jan. 14, 2016; 13(4);400-11 [Pubmed: 26760575]
Throughput
- High Throughput
Additional Notes
- RIP-Seq
- iCLIP
Curated By
- BioGRID