BAIT
HDAC4
4932408F19Rik, AI047285
histone deacetylase 4
GO Process (33)
GO Function (15)
GO Component (12)
Gene Ontology Biological Process
- chromatin remodeling [ISO]
- histone H3 deacetylation [ISO]
- histone H4 deacetylation [ISO]
- histone deacetylation [ISO]
- negative regulation of cell proliferation [IDA, IMP]
- negative regulation of glycolytic process [IMP]
- negative regulation of myotube differentiation [ISO]
- negative regulation of osteoblast differentiation [IMP]
- negative regulation of sequence-specific DNA binding transcription factor activity [ISO]
- negative regulation of transcription from RNA polymerase II promoter [IDA, IGI, ISO]
- negative regulation of transcription, DNA-templated [IDA, IMP, ISO]
- osteoblast development [IMP]
- peptidyl-lysine deacetylation [ISO]
- positive regulation of cell proliferation [ISO]
- positive regulation of lamellipodium assembly [ISO]
- positive regulation of neuron apoptotic process [ISO]
- positive regulation of protein sumoylation [ISO]
- positive regulation of reactive oxygen species biosynthetic process [ISO]
- positive regulation of sequence-specific DNA binding transcription factor activity [ISO]
- positive regulation of smooth muscle cell migration [ISO]
- positive regulation of smooth muscle cell proliferation [ISO]
- positive regulation of transcription from RNA polymerase II promoter [IMP, ISO]
- positive regulation of transcription, DNA-templated [IMP]
- protein deacetylation [IDA]
- regulation of cardiac muscle contraction by calcium ion signaling [IMP]
- regulation of gene expression, epigenetic [ISO]
- regulation of protein binding [ISO]
- regulation of skeletal muscle fiber development [IGI]
- regulation of striated muscle cell differentiation [IGI]
- response to denervation involved in regulation of muscle adaptation [IMP]
- response to drug [ISO]
- response to interleukin-1 [ISO]
- skeletal system development [IMP]
Gene Ontology Molecular Function- DNA binding [IDA]
- activating transcription factor binding [ISO]
- core promoter binding [ISO]
- histone deacetylase activity [ISO]
- histone deacetylase binding [ISO]
- potassium ion binding [ISO]
- protein binding [IPI]
- protein deacetylase activity [IDA, ISO]
- protein kinase binding [IPI]
- repressing transcription factor binding [ISO]
- sequence-specific DNA binding [ISO]
- transcription corepressor activity [IGI]
- transcription factor binding [IPI, ISO]
- transcription regulatory region DNA binding [ISO]
- zinc ion binding [ISO]
- DNA binding [IDA]
- activating transcription factor binding [ISO]
- core promoter binding [ISO]
- histone deacetylase activity [ISO]
- histone deacetylase binding [ISO]
- potassium ion binding [ISO]
- protein binding [IPI]
- protein deacetylase activity [IDA, ISO]
- protein kinase binding [IPI]
- repressing transcription factor binding [ISO]
- sequence-specific DNA binding [ISO]
- transcription corepressor activity [IGI]
- transcription factor binding [IPI, ISO]
- transcription regulatory region DNA binding [ISO]
- zinc ion binding [ISO]
Gene Ontology Cellular Component
Mus musculus
PREY
NF1
AW494271, E030030H24Rik, Nf-1, RP23-188A3.1
neurofibromatosis 1
GO Process (66)
GO Function (7)
GO Component (10)
Gene Ontology Biological Process
- MAPK cascade [IMP]
- Ras protein signal transduction [IGI, IMP]
- Schwann cell development [IMP]
- actin cytoskeleton organization [IGI, IMP]
- adrenal gland development [IMP]
- artery morphogenesis [IMP]
- brain development [IMP]
- camera-type eye morphogenesis [IMP]
- cell communication [IMP]
- cerebral cortex development [IMP]
- cognition [ISO]
- collagen fibril organization [IMP]
- extracellular matrix organization [IMP]
- extrinsic apoptotic signaling pathway via death domain receptors [IGI]
- forebrain astrocyte development [IMP]
- forebrain morphogenesis [IMP]
- heart development [IMP]
- liver development [IMP]
- metanephros development [IMP]
- myelination in peripheral nervous system [IMP]
- negative regulation of MAP kinase activity [IGI, IMP]
- negative regulation of MAPK cascade [IMP, ISO]
- negative regulation of Rac protein signal transduction [IGI]
- negative regulation of Ras protein signal transduction [IGI, IMP]
- negative regulation of angiogenesis [IGI]
- negative regulation of astrocyte differentiation [IMP]
- negative regulation of cell migration [IGI, IMP, ISO]
- negative regulation of cell proliferation [IGI, IMP]
- negative regulation of cell-matrix adhesion [IGI]
- negative regulation of endothelial cell proliferation [IMP, ISO]
- negative regulation of fibroblast proliferation [IMP]
- negative regulation of neuroblast proliferation [IMP]
- negative regulation of neurotransmitter secretion [IGI, IMP]
- negative regulation of oligodendrocyte differentiation [IMP]
- negative regulation of osteoclast differentiation [IGI]
- negative regulation of protein kinase activity [IGI, IMP]
- negative regulation of transcription factor import into nucleus [IMP]
- neural tube development [IGI]
- osteoblast differentiation [IMP]
- peripheral nervous system development [IMP]
- phosphatidylinositol 3-kinase signaling [IMP]
- pigmentation [IGI, IMP]
- positive regulation of Ras GTPase activity [IGI, IMP, ISO]
- positive regulation of adenylate cyclase activity [IMP]
- positive regulation of apoptotic process [IGI, IMP]
- positive regulation of endothelial cell proliferation [IGI]
- positive regulation of extrinsic apoptotic signaling pathway in absence of ligand [IMP]
- positive regulation of extrinsic apoptotic signaling pathway via death domain receptors [IMP]
- positive regulation of neuron apoptotic process [IGI, IMP]
- regulation of Ras GTPase activity [ISO]
- regulation of angiogenesis [IMP, ISO]
- regulation of blood vessel endothelial cell migration [ISO]
- regulation of bone resorption [IMP]
- regulation of cell proliferation [IGI]
- regulation of cell-matrix adhesion [IMP]
- regulation of glial cell differentiation [IMP]
- regulation of long-term neuronal synaptic plasticity [IGI, IMP]
- regulation of neuron differentiation [ISO]
- regulation of synaptic transmission, GABAergic [IGI]
- response to hypoxia [IMP]
- skeletal muscle tissue development [IMP]
- smooth muscle tissue development [IMP]
- spinal cord development [IMP]
- sympathetic nervous system development [IMP]
- visual learning [IGI, IMP]
- wound healing [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.
Huntington's disease (HD) is a monogenic disorder, driven by the expansion of a trinucleotide (CAG) repeat within the huntingtin (Htt) gene and culminating in neuronal degeneration in the brain, predominantly in the striatum and cortex. Histone deacetylase 4 (Hdac4) was previously found to contribute to the disease progression, providing a potential therapeutic target. Hdac4 knockdown reduced accumulation of misfolded Htt ... [more]
Mol Cell Proteomics Dec. 09, 2018; 18(8 suppl 1);S92-S113 [Pubmed: 31040226]
Throughput
- High Throughput
Curated By
- BioGRID