BAIT

RPT3

26S PROTEASOME AAA-ATPASE SUBUNIT RPT3, MCK7.16, MCK7_16, regulatory particle triple-A ATPase 3, AT5G58290
regulatory particle triple-A ATPase 3
GO Process (1)
GO Function (1)
GO Component (7)
Arabidopsis thaliana (Columbia)
PREY

RPN1A

26S PROTEASOME REGULATORY SUBUNIT S2 1A, ATRPN1A, F23N11.10, F23N11_10, AT2G20580
26S proteasome regulatory subunit S2 1A
Arabidopsis thaliana (Columbia)

Co-fractionation

Interaction inferred from the presence of two or more protein subunits in a partially purified protein preparation. If co-fractionation is demonstrated between 3 or more proteins, then add them as a complex.

Publication

A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies.

McWhite CD, Papoulas O, Drew K, Cox RM, June V, Dong OX, Kwon T, Wan C, Salmi ML, Roux SJ, Browning KS, Chen ZJ, Ronald PC, Marcotte EM

Plants are foundational for global ecological and economic systems, but most plant proteins remain uncharacterized. Protein interaction networks often suggest protein functions and open new avenues to characterize genes and proteins. We therefore systematically determined protein complexes from 13 plant species of scientific and agricultural importance, greatly expanding the known repertoire of stable protein complexes in plants. By using co-fractionation ... [more]

Cell Mar. 16, 2020; (); [Pubmed: 32191846]

Quantitative Score

  • 0.975127844 [CF-MS score]

Throughput

  • High Throughput

Additional Notes

  • Co-fractionation MS (CF-MS) was carried out to identify high confidence protein interactions having an interaction score above a 10% FDR threshold (CF-MS score >= 0.509).
  • Interactor A: Orthogroup ENOG411DPVW, Annotation: 26S protease regulatory subunit 6B
  • Interactor B: Orthogroup ENOG411DWD0, Annotation: 26s proteasome regulatory subunit

Related interactions

InteractionExperimental Evidence CodeDatasetThroughputScoreCurated ByNotes
RPN1A RPT3
Affinity Capture-MS
Affinity Capture-MS

An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.

High-BioGRID
-

Curated By

  • BioGRID