BAIT
ACBD5
RP11-85G18.5
acyl-CoA binding domain containing 5
GO Process (3)
GO Function (0)
GO Component (5)
Gene Ontology Biological Process
Gene Ontology Cellular Component
Homo sapiens
PREY
PPP2R3A
PPP2R3, PR130, PR72
protein phosphatase 2, regulatory subunit B'', alpha
GO Process (10)
GO Function (2)
GO Component (1)
Gene Ontology Biological Process
- Wnt signaling pathway involved in somitogenesis [IC]
- eye photoreceptor cell differentiation [IGI]
- negative regulation of canonical Wnt signaling pathway [IGI]
- positive regulation of canonical Wnt signaling pathway [IDA]
- positive regulation of protein catabolic process [IMP]
- protein dephosphorylation [ISS]
- regulation of catalytic activity [TAS]
- regulation of cell motility involved in somitogenic axis elongation [IGI]
- somatic muscle development [IGI]
- somite development [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
A proximity-dependent biotinylation map of a human cell.
Compartmentalization is a defining characteristic of eukaryotic cells, and partitions distinct biochemical processes into discrete subcellular locations. Microscopy1 and biochemical fractionation coupled with mass spectrometry2-4 have defined the proteomes of a variety of different organelles, but many intracellular compartments have remained refractory to such approaches. Proximity-dependent biotinylation techniques such as BioID provide an alternative approach to define the composition of ... [more]
Nature Jun. 02, 2021; (); [Pubmed: 34079125]
Quantitative Score
- 260.0 [FoldChange]
Throughput
- High Throughput
Additional Notes
- BioID
- SAINTexpress (v.3.6.1) was used to identify proximity interactions and those with a Bayesian FDR =< 0.01 were considered high confidence. The score represents the fold change of the average spectral count in sample replicates relative to the average in control replicates.
Curated By
- BioGRID