BAIT
AKAP1
AKAP, AKAP121, AKAP149, AKAP84, D-AKAP1, PPP1R43, PRKA1, SAKAP84, TDRD17
A kinase (PRKA) anchor protein 1
GO Process (1)
GO Function (3)
GO Component (3)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Homo sapiens
PREY
MUL1
C1orf166, GIDE, MAPL, MULAN, RNF218, RP11-401M16.2
mitochondrial E3 ubiquitin protein ligase 1
GO Process (18)
GO Function (6)
GO Component (6)
Gene Ontology Biological Process
- activation of JUN kinase activity [IDA]
- activation of cysteine-type endopeptidase activity involved in apoptotic process [IDA]
- cellular response to exogenous dsRNA [IDA]
- mitochondrial fission [IMP]
- mitochondrion localization [IMP]
- negative regulation of cell growth [IDA]
- negative regulation of chemokine (C-C motif) ligand 5 production [IMP]
- negative regulation of defense response to virus by host [IMP]
- negative regulation of innate immune response [IMP]
- negative regulation of mitochondrial fusion [IDA]
- negative regulation of protein kinase B signaling [IDA]
- negative regulation of type I interferon-mediated signaling pathway [IMP]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [IMP]
- positive regulation of mitochondrial fission [IDA]
- positive regulation of protein sumoylation [IDA]
- protein stabilization [IMP]
- protein ubiquitination [IDA]
- regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [IDA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
A proximity-dependent biotinylation map of a human cell.
Compartmentalization is a defining characteristic of eukaryotic cells, and partitions distinct biochemical processes into discrete subcellular locations. Microscopy1 and biochemical fractionation coupled with mass spectrometry2-4 have defined the proteomes of a variety of different organelles, but many intracellular compartments have remained refractory to such approaches. Proximity-dependent biotinylation techniques such as BioID provide an alternative approach to define the composition of ... [more]
Nature Jun. 02, 2021; (); [Pubmed: 34079125]
Quantitative Score
- 120.0 [FoldChange]
Throughput
- High Throughput
Additional Notes
- BioID
- SAINTexpress (v.3.6.1) was used to identify proximity interactions and those with a Bayesian FDR =< 0.01 were considered high confidence. The score represents the fold change of the average spectral count in sample replicates relative to the average in control replicates.
Curated By
- BioGRID