BAIT
GJD3
CX31.9, Cx30.2, GJA11, GJC1
gap junction protein, delta 3, 31.9kDa
GO Process (2)
GO Function (1)
GO Component (3)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
NLGN1
NL1
neuroligin 1
GO Process (36)
GO Function (6)
GO Component (7)
Gene Ontology Biological Process
- N-methyl-D-aspartate receptor clustering [ISS]
- alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering [ISS]
- calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules [ISS]
- cytoskeletal matrix organization at active zone [ISS]
- establishment of protein localization [ISS]
- heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [ISS]
- metabolic process [IBA]
- nervous system development [ISS]
- neurexin clustering [ISS]
- neuron cell-cell adhesion [ISS, TAS]
- neuronal signal transduction [TAS]
- positive regulation of dendritic spine development [ISS]
- positive regulation of excitatory postsynaptic membrane potential [ISS]
- positive regulation of filopodium assembly [ISS]
- positive regulation of intracellular signal transduction [ISS]
- positive regulation of ruffle assembly [ISS]
- positive regulation of synapse assembly [ISS]
- positive regulation of synaptic transmission, GABAergic [ISS]
- positive regulation of synaptic transmission, glutamatergic [ISS]
- positive regulation of synaptic vesicle endocytosis [ISS]
- positive regulation of synaptic vesicle exocytosis [ISS]
- postsynaptic density protein 95 clustering [ISS]
- postsynaptic membrane assembly [ISS]
- presynaptic membrane assembly [ISS]
- protein homooligomerization [ISS]
- protein localization to synapse [ISS]
- protein targeting [ISS]
- receptor localization to synapse [ISS]
- regulation of N-methyl-D-aspartate selective glutamate receptor activity [ISS]
- regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity [ISS]
- regulation of neuron differentiation [ISS]
- regulation of synaptic transmission [IBA]
- synapse assembly [IBA, ISS]
- synaptic vesicle clustering [ISS]
- synaptic vesicle targeting [ISS]
- terminal button organization [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
A proximity-dependent biotinylation map of a human cell.
Compartmentalization is a defining characteristic of eukaryotic cells, and partitions distinct biochemical processes into discrete subcellular locations. Microscopy1 and biochemical fractionation coupled with mass spectrometry2-4 have defined the proteomes of a variety of different organelles, but many intracellular compartments have remained refractory to such approaches. Proximity-dependent biotinylation techniques such as BioID provide an alternative approach to define the composition of ... [more]
Nature Jun. 02, 2021; (); [Pubmed: 34079125]
Quantitative Score
- 35.0 [FoldChange]
Throughput
- High Throughput
Additional Notes
- BioID
- SAINTexpress (v.3.6.1) was used to identify proximity interactions and those with a Bayesian FDR =< 0.01 were considered high confidence. The score represents the fold change of the average spectral count in sample replicates relative to the average in control replicates.
Curated By
- BioGRID