BAIT
PARD3
ASIP, Baz, PAR3, PAR3alpha, PARD-3, PARD3A, PPP1R118, SE2-5L16, SE2-5LT1, SE2-5T2, RP11-406D17.1
par-3 family cell polarity regulator
GO Process (14)
GO Function (4)
GO Component (6)
Gene Ontology Biological Process
- asymmetric cell division [TAS]
- axonogenesis [TAS]
- cell junction assembly [TAS]
- cell-cell junction organization [TAS]
- establishment of epithelial cell polarity [ISS]
- establishment or maintenance of cell polarity [TAS]
- myelination in peripheral nervous system [ISS]
- negative regulation of peptidyl-threonine phosphorylation [ISS]
- positive regulation of myelination [ISS]
- protein complex assembly [TAS]
- protein kinase C-activating G-protein coupled receptor signaling pathway [TAS]
- protein targeting to membrane [ISS]
- tight junction assembly [ISS, TAS]
- transforming growth factor beta receptor signaling pathway [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
TRIO
ARHGEF23, tgat
trio Rho guanine nucleotide exchange factor
GO Process (8)
GO Function (2)
GO Component (1)
Gene Ontology Biological Process
- apoptotic signaling pathway [TAS]
- axon guidance [TAS]
- neurotrophin TRK receptor signaling pathway [TAS]
- positive regulation of GTPase activity [TAS]
- positive regulation of apoptotic process [TAS]
- regulation of small GTPase mediated signal transduction [TAS]
- small GTPase mediated signal transduction [TAS]
- transmembrane receptor protein tyrosine phosphatase signaling pathway [TAS]
Gene Ontology Molecular Function
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
A proximity-dependent biotinylation map of a human cell.
Compartmentalization is a defining characteristic of eukaryotic cells, and partitions distinct biochemical processes into discrete subcellular locations. Microscopy1 and biochemical fractionation coupled with mass spectrometry2-4 have defined the proteomes of a variety of different organelles, but many intracellular compartments have remained refractory to such approaches. Proximity-dependent biotinylation techniques such as BioID provide an alternative approach to define the composition of ... [more]
Nature Jun. 02, 2021; (); [Pubmed: 34079125]
Quantitative Score
- 11.51 [FoldChange]
Throughput
- High Throughput
Additional Notes
- BioID
- SAINTexpress (v.3.6.1) was used to identify proximity interactions and those with a Bayesian FDR =< 0.01 were considered high confidence. The score represents the fold change of the average spectral count in sample replicates relative to the average in control replicates.
Curated By
- BioGRID