BAIT
RAB5C
L1880, RAB5CL, RAB5L, RABL
RAB5C, member RAS oncogene family
GO Process (5)
GO Function (4)
GO Component (7)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
GCC2
GCC185, RANBP2L4, REN53
GRIP and coiled-coil domain containing 2
GO Process (10)
GO Function (2)
GO Component (6)
Gene Ontology Biological Process
- Golgi ribbon formation [IMP]
- Golgi to plasma membrane protein transport [IMP]
- late endosome to Golgi transport [IMP]
- microtubule anchoring [IMP]
- microtubule organizing center organization [IMP]
- protein localization to Golgi apparatus [IMP]
- protein targeting to lysosome [IMP]
- recycling endosome to Golgi transport [IMP]
- regulation of protein exit from endoplasmic reticulum [IMP]
- retrograde transport, endosome to Golgi [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
A proximity-dependent biotinylation map of a human cell.
Compartmentalization is a defining characteristic of eukaryotic cells, and partitions distinct biochemical processes into discrete subcellular locations. Microscopy1 and biochemical fractionation coupled with mass spectrometry2-4 have defined the proteomes of a variety of different organelles, but many intracellular compartments have remained refractory to such approaches. Proximity-dependent biotinylation techniques such as BioID provide an alternative approach to define the composition of ... [more]
Nature Jun. 02, 2021; (); [Pubmed: 34079125]
Quantitative Score
- 12.64 [FoldChange]
Throughput
- High Throughput
Additional Notes
- BioID
- SAINTexpress (v.3.6.1) was used to identify proximity interactions and those with a Bayesian FDR =< 0.01 were considered high confidence. The score represents the fold change of the average spectral count in sample replicates relative to the average in control replicates.
Curated By
- BioGRID