BAIT
STIL
MCPH7, SIL, RP1-18D14.8
SCL/TAL1 interrupting locus
GO Process (16)
GO Function (1)
GO Component (3)
Gene Ontology Biological Process
- cell proliferation [TAS]
- centrosome duplication [IDA, IMP]
- determination of left/right symmetry [ISS]
- embryonic axis specification [ISS]
- floor plate development [ISS]
- forebrain development [ISS]
- heart looping [ISS]
- in utero embryonic development [ISS]
- mitotic spindle organization [IMP]
- multicellular organism growth [ISS]
- negative regulation of apoptotic process [ISS]
- neural tube closure [ISS]
- neural tube development [ISS]
- notochord development [ISS]
- protein localization to centrosome [IMP]
- smoothened signaling pathway [ISS]
Gene Ontology Molecular Function
Homo sapiens
PREY
AKAP9
AKAP-9, AKAP350, AKAP450, CG-NAP, HYPERION, LQT11, MU-RMS-40.16A, PPP1R45, PRKA9, YOTIAO
A kinase (PRKA) anchor protein 9
GO Process (10)
GO Function (5)
GO Component (6)
Gene Ontology Biological Process
- G2/M transition of mitotic cell cycle [TAS]
- cellular response to cAMP [IMP]
- mitotic cell cycle [TAS]
- positive regulation of peptidyl-serine phosphorylation [IMP]
- positive regulation of potassium ion transmembrane transporter activity [IMP]
- regulation of heart rate by cardiac conduction [IMP]
- regulation of membrane repolarization [IMP]
- regulation of ventricular cardiac muscle cell membrane repolarization [IMP]
- synaptic transmission [TAS]
- transport [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
A proximity-dependent biotinylation map of a human cell.
Compartmentalization is a defining characteristic of eukaryotic cells, and partitions distinct biochemical processes into discrete subcellular locations. Microscopy1 and biochemical fractionation coupled with mass spectrometry2-4 have defined the proteomes of a variety of different organelles, but many intracellular compartments have remained refractory to such approaches. Proximity-dependent biotinylation techniques such as BioID provide an alternative approach to define the composition of ... [more]
Nature Jun. 02, 2021; (); [Pubmed: 34079125]
Quantitative Score
- 14.0 [FoldChange]
Throughput
- High Throughput
Additional Notes
- BioID
- SAINTexpress (v.3.6.1) was used to identify proximity interactions and those with a Bayesian FDR =< 0.01 were considered high confidence. The score represents the fold change of the average spectral count in sample replicates relative to the average in control replicates.
Curated By
- BioGRID