BAIT
DDX39A
BAT1, BAT1L, DDX39, DDXL, URH49
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A
GO Process (2)
GO Function (2)
GO Component (3)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Homo sapiens
PREY
PPP3CB
CALNA2, CALNB, CNA2, PP2Bbeta, RP11-345K20.1
protein phosphatase 3, catalytic subunit, beta isozyme
GO Process (21)
GO Function (9)
GO Component (4)
Gene Ontology Biological Process
- Fc-epsilon receptor signaling pathway [TAS]
- T cell activation [TAS]
- T cell proliferation [NAS]
- axon extension [TAS]
- calcineurin-NFAT signaling cascade [IDA]
- calcium ion-dependent exocytosis [ISS]
- cellular response to drug [IDA]
- dephosphorylation [TAS]
- innate immune response [TAS]
- learning [TAS]
- memory [TAS]
- positive regulation of NFAT protein import into nucleus [IDA]
- positive regulation of insulin secretion involved in cellular response to glucose stimulus [ISS]
- positive regulation of transcription from RNA polymerase II promoter [IDA]
- positive regulation of transcription, DNA-templated [NAS]
- protein dephosphorylation [ISS]
- protein phosphorylation [ISS]
- regulation of insulin secretion [ISS]
- regulation of synaptic plasticity [TAS]
- signal transduction [NAS]
- social behavior [IEP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-RNA
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and associated RNA species identified by Northern blot, RT-PCR, affinity labeling, sequencing, or microarray analysis.
Publication
SUMOylation of DDX39A Alters Binding and Export of Antiviral Transcripts to Control Innate Immunity.
The RNA helicase DDX39A plays an important role in the RNA splicing/export process. In our study, human DDX39A facilitated RNA virus escape from innate immunity to promote virus proliferation by trapping TRAF3, TRAF6, and MAVS mRNAs in the HEK293T cell nucleus. DDX39A was a target for SUMOylation. SUMO1, 2, and 3 modifications were found on immunoprecipitated DDX39A. However, only the ... [more]
J Immunol Dec. 01, 2019; 205(1);168-180 [Pubmed: 32393512]
Quantitative Score
- 2.0251087 [FoldChange]
Throughput
- High Throughput
Additional Notes
- Affinity capture-RNA was carried out to identify high-confidence protein-RNA interactions with a Fold Change over control immuniprecipitation > 2.0 (Fold change reported here)
Curated By
- BioGRID