NDC80
Gene Ontology Biological Process
- attachment of mitotic spindle microtubules to kinetochore [IBA]
- attachment of spindle microtubules to kinetochore [IMP]
- chromosome segregation [IMP]
- establishment of mitotic spindle orientation [IMP]
- mitotic cell cycle [TAS]
- mitotic nuclear division [TAS]
- mitotic sister chromatid segregation [TAS]
- mitotic spindle organization [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
CALCOCO1
Gene Ontology Biological Process
Gene Ontology Molecular Function- armadillo repeat domain binding [IPI]
- beta-catenin binding [IPI]
- ligand-dependent nuclear receptor transcription coactivator activity [IDA]
- protein C-terminus binding [IPI]
- protein binding [IPI]
- sequence-specific DNA binding [IDA]
- transcription coactivator activity [IMP, ISS]
- transcription cofactor activity [IDA]
- transcription regulatory region DNA binding [IDA]
- armadillo repeat domain binding [IPI]
- beta-catenin binding [IPI]
- ligand-dependent nuclear receptor transcription coactivator activity [IDA]
- protein C-terminus binding [IPI]
- protein binding [IPI]
- sequence-specific DNA binding [IDA]
- transcription coactivator activity [IMP, ISS]
- transcription cofactor activity [IDA]
- transcription regulatory region DNA binding [IDA]
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
Thousands of interactions assemble proteins into modules that impart spatial and functional organization to the cellular proteome. Through affinity-purification mass spectrometry, we have created two proteome-scale, cell-line-specific interaction networks. The first, BioPlex 3.0, results from affinity purification of 10,128 human proteins-half the proteome-in 293T cells and includes 118,162 interactions among 14,586 proteins. The second results from 5,522 immunoprecipitations in HCT116 ... [more]
Quantitative Score
- 0.890724278 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 3.0 HEK 293T cells CompPASS score = 0.890724278, threshold = 0.75. Quantitative scores are calculated by CompPASS-Plus (Huttlin et al. Cell 2015, PMID: 26186194). The 0.75 threshold represents the top 2% of scores in HEK293T.
- This data may be re-scored from BioPlex 1.0 (PMID: 26186194) and BioPlex 2.0 (PMID: 28514442). Only scores from within the same cell line in BioPlex 3.0 (PMID: 33961781) should be compared directly. For comparison of HEK293T and HCT116 interaction networks with relaxed threshold = 0.1, see BioPlex Interactome (https://bioplex.hms.harvard.edu/index.php).
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| NDC80 CALCOCO1 | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | High | - | BioGRID | - | |
| NDC80 CALCOCO1 | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | High | - | BioGRID | - |
Curated By
- BioGRID